GEO Accession viewer

NCBI > GEO > Accession Display

Not logged in | Login

GEO help: Mouse over screen elements for information.

Sample GSM106250

Query DataSets for GSM106250

Status

Public on Apr 25, 2006

Title

Placenta_nl2

Sample type

RNA

Channel 1

Source name

Placenta_nl2 with Cy5

Organism

Characteristics

Placental tissue from normal pregnancy

Extracted molecule

total RNA

Label

Cy5

Channel 2

Source name

Placenta_nl with Cy3

Organism

Characteristics

A mixture of placental tissue from normal pregnancy

Extracted molecule

total RNA

Label

Cy3

Description

Placental biopsies were obtained during Caesarean section from normotensive patients. A mixture of 3 placentas from normal subjects were used for a template control.

Data processing

Data processed with FeatureExtraction v7.1

Submission date

Apr 22, 2006

Last update date

Nov 13, 2015

Contact name

Haruki Nishizawa

E-mail(s)

[email protected]

Organization name

Fujita Health University

Department

Gynecology & Obstetrics

Street address

1-98 Dengakugakubo Kutsukake-cho

City

Toyoake

State/province

Aichi

ZIP/Postal code

470-1192

Country

Japan

Platform ID

Series (1)

Microarray Analysis of Differentially Expressed Genes in Placental Tissue of Severe Preeclampsia

Relations

Reanalyzed by

Data table header descriptions
ID_REF
VALUE	Log10 Ratio of normalized Cy5 (red) signal to normalized Cy3 (green) signal
PValueLogRatio	p-value of the log ratio as determined by Agilent error model
gProcessedSignal	normalized and background subtracted Cy3 (green) signal
rProcessedSignal	normalized and background subtracted Cy5 (red) signal
gMeanSignal	raw Cy3 (green) signal intensity
rMeanSignal	raw Cy5 (red) signal intensity

Data table
ID_REF	VALUE	PValueLogRatio	gProcessedSignal	rProcessedSignal	gMeanSignal	rMeanSignal
1	-8.84E-01	9.25E-27	3.94E+03	5.15E+02	7.62E+02	1.47E+02
2	-3.73E-01	2.65E-04	2.68E+02	1.13E+02	1.45E+02	6.40E+01
3	4.08E-02	4.59E-01	5.93E+02	6.51E+02	1.98E+02	1.67E+02
4	-5.85E-02	2.92E-01	6.43E+02	5.62E+02	2.08E+02	1.50E+02
5	-1.35E-01	1.31E-02	8.49E+02	6.23E+02	2.42E+02	1.64E+02
6	-5.28E-01	1.81E-09	4.31E+02	1.28E+02	1.76E+02	6.61E+01
7	-1.35E+00	1.57E-32	4.43E+03	1.96E+02	8.62E+02	8.32E+01
8	-7.90E-01	2.46E-19	7.69E+02	1.25E+02	2.43E+02	6.67E+01
9	-3.00E-01	1.05E-07	1.25E+03	6.26E+02	3.14E+02	1.67E+02
10	-2.33E-01	1.53E-05	1.44E+03	8.45E+02	3.44E+02	2.12E+02
11	-5.33E-01	2.96E-14	8.57E+02	2.51E+02	2.53E+02	9.05E+01
12	-1.53E-02	7.58E-01	2.37E+03	2.29E+03	4.87E+02	5.14E+02
13	-4.36E-01	1.46E-09	5.81E+02	2.13E+02	2.06E+02	8.33E+01
14	-1.38E+00	1.16E-32	4.04E+03	1.67E+02	8.06E+02	7.73E+01
15	-3.18E-01	4.93E-04	2.96E+02	1.42E+02	1.59E+02	6.93E+01
16	-7.18E-01	4.99E-14	5.06E+02	9.69E+01	1.98E+02	6.10E+01
17	-2.95E-01	4.15E-07	9.36E+02	4.75E+02	2.64E+02	1.35E+02
18	-7.72E-02	1.35E-01	1.14E+03	9.52E+02	2.89E+02	2.32E+02
19	4.36E-02	3.88E-01	1.29E+03	1.43E+03	3.11E+02	3.30E+02
20	-1.78E-02	7.77E-01	4.00E+02	3.84E+02	1.66E+02	1.13E+02

Total number of rows: 43931

Table truncated, full table size 2583 Kbytes.

Supplementary data files not provided

| NLM | NIH | GEO Help | Disclaimer | Accessibility |