|
| Status |
Public on Oct 18, 2013 |
| Title |
X5408-GBM methylation [X5408] |
| Sample type |
genomic |
| |
|
| Source name |
GBM tissue
|
| Organism |
Homo sapiens |
| Characteristics |
tissue: GBM
|
| Extracted molecule |
genomic DNA |
| Extraction protocol |
DNA extracted by standard proteinase K/RNase treatment and phenol/chloroform extraction according to standard instructions
|
| Label |
Cy5 and Cy3
|
| Label protocol |
Standard Illumina Protocol
|
| |
|
| Hybridization protocol |
Bisulfite modification of DNA was conducted using an EZ DNA Methylation Kit
|
| Scan protocol |
Array was imaged using BeadArray Reader using stnandard Illumina settings
|
| Description |
biorepository: Columbia University
|
| Data processing |
Illumina BeadStudio software
|
| |
|
| Submission date |
Sep 17, 2013 |
| Last update date |
Oct 18, 2013 |
| Contact name |
Rose K Lai |
| E-mail(s) |
[email protected]
|
| Phone |
3238650341
|
| Organization name |
U of Southern California
|
| Department |
Neurology
|
| Street address |
1441 Eastlake Ave NTT Rm 3407
|
| City |
Los Angeles |
| State/province |
CA |
| ZIP/Postal code |
90089 |
| Country |
USA |
| |
|
| Platform ID |
GPL8490 |
| Series (1) |
| GSE50923 |
Genome-wide methylation analyses in glioblastoma multiforme (GBM) |
|
