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Sample GSM1287099 Query DataSets for GSM1287099
Status Public on Dec 11, 2013
Title Whole fly tissue: hatched and raised in earth gravity uninfected biological rep 3
Sample type RNA
 
Source name Whole homogenized uninfected drosophila
Organism Drosophila melanogaster
Characteristics strain: Oregon R
tissue: whole organism
life stage: adult
infection: none
Extracted molecule total RNA
Extraction protocol RNA was extracted with the Qiagen Rneasy kit according to the manufacturer's instructions.
Label biotin
Label protocol Biotinylated cRNA were prepared according to the standard protocols described in the Affymetrix Gene Expression Analysis Technical Manual
 
Hybridization protocol Following fragmentation, 10 ug of cRNA were hybridized for 16 hr at 45C on GeneChip Drosophila mlanogaster 3' IVT arrays. GeneChips were washed and stained in the Affymetrix Fluidics Station 400.
Scan protocol GeneChips were scanned using the Affymetrix GeneChip Scanner 3000
Description Gene expression data from a pool of 4-20 whole flies hatched and raised in earth gravity, uninfected
Data processing The data were analyzed with Partek Genomics Suite
 
Submission date Dec 10, 2013
Last update date Dec 11, 2013
Contact name Michael George
E-mail(s) [email protected]
Organization name University of California, Davis
Department Medical Microbiology and Immunology
Street address 451 Health Sciences Drive
City Davis
State/province CA
ZIP/Postal code 95616
Country USA
 
Platform ID GPL1322
Series (1)
GSE53196 Expression data from drosophila melanogaster

Data table header descriptions
ID_REF
VALUE Partek signal intensity

Data table
ID_REF VALUE
1625114_at 6.82086
1634187_x_at 9.45033
1626253_at 4.35566
1636568_at 5.10258
1638484_at 6.59598
1629061_s_at 9.47581
1633946_at 8.12494
1641450_s_at 5.65298
1635287_at 4.66652
1625012_s_at 10.4355
1635263_at 7.43724
1634731_at 8.82016
1637622_s_at 3.47558
1639934_at 10.0747
1631388_at 7.9109
1631100_at 6.00303
1640152_at 7.87782
1632841_x_at 8.19375
1635115_at 8.46136
1631638_at 8.60874

Total number of rows: 18769

Table truncated, full table size 353 Kbytes.




Supplementary file Size Download File type/resource
GSM1287099_06_UGC.CEL.gz 2.1 Mb (ftp)(http) CEL
Processed data included within Sample table

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