GEO Publications
Handout
NAR 2024 (latest)
NAR 2002 (original)
All publications
FAQ
MIAME
Email GEO
NCBI
>
GEO
>
Accession Display
Not logged in |
Login
GEO help:
Mouse over screen elements for information.
Scope:
Self
Platform
Samples
Series
Family
Format:
HTML
SOFT
MINiML
Amount:
Brief
Quick
GEO accession:
Sample GSM132773
Query DataSets for GSM132773
Status
Public on Mar 14, 2007
Title
Pilocytic astrocytoma chip 8030
Sample type
RNA
Source name
Pilocytic astrocytoma
Organism
Homo sapiens
Characteristics
Brain tumor, WHO grade I, Pilocytic astrocytoma
Extracted molecule
total RNA
Label
biotinylated aRNA
Description
Pilocytic astrocytoma. Chip ID 8030
Data processing
Transformation procedure used:GCOS1.4. Array scaled so that the average probe set hybridization signal intensity value (target intensity) was 1500.
Submission date
Aug 30, 2006
Last update date
Aug 28, 2018
Contact name
Mukesh K Sharma
E-mail(s)
[email protected]
Phone
314-362-1151
Fax
314-362-2388
Organization name
Washington University School of Medicine in Saint Louis
Department
Neurology
Street address
4566 Scott Avenue, room 306
City
Saint Louis
State/province
MO
ZIP/Postal code
63110
Country
USA
Platform ID
GPL570
Series (1)
GSE5675
Pilocytic astrocytoma
Relations
Reanalyzed by
GSE64985
Reanalyzed by
GSE119087
Data table header descriptions
ID_REF
VALUE
GCOS 1.4
ABS_CALL
DETECTION P-VALUE
Data table
ID_REF
VALUE
ABS_CALL
DETECTION P-VALUE
AFFX-BioB-5_at
620.1
P
0.002556
AFFX-BioB-M_at
272.1
A
0.102165
AFFX-BioB-3_at
13.6
A
0.724854
AFFX-BioC-5_at
1081.7
P
0.000297
AFFX-BioC-3_at
600.8
P
0.000581
AFFX-BioDn-5_at
1687.7
P
0.000445
AFFX-BioDn-3_at
8970.8
P
0.000581
AFFX-CreX-5_at
9.7
A
0.973889
AFFX-CreX-3_at
57.9
A
0.686277
AFFX-DapX-5_at
8
A
0.834139
AFFX-DapX-M_at
137
A
0.559354
AFFX-DapX-3_at
33.4
A
0.794268
AFFX-LysX-5_at
80703.1
P
0.000044
AFFX-LysX-M_at
129204.6
P
0.000044
AFFX-LysX-3_at
164616
P
0.000044
AFFX-PheX-5_at
55339.4
P
0.000044
AFFX-PheX-M_at
72394.5
P
0.000044
AFFX-PheX-3_at
44858
P
0.000044
AFFX-ThrX-5_at
13774.8
P
0.000044
AFFX-ThrX-M_at
18804.7
P
0.000044
Total number of rows:
54675
Table truncated, full table size
1471 Kbytes
.
Supplementary file
Size
Download
File type/resource
GSM132773.CEL.gz
7.6 Mb
(ftp)
(http)
CEL
|
NLM
|
NIH
|
GEO Help
|
Disclaimer
|
Accessibility
|
