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Sample GSM136787 Query DataSets for GSM136787
Status Public on Sep 22, 2006
Title A549 cell line – exposure 2 Cobalt 2mM – 30 mn - replicate3
Sample type RNA
 
Channel 1
Source name A549 cell line – 2mM Cobalt – 30mn
Organism Homo sapiens
Characteristics Cobalt sample from A549 cells
Extracted molecule total RNA
Label Cy3
 
Channel 2
Source name A549 cell line – 0mM Cobalt – 30mn
Organism Homo sapiens
Characteristics Control sample from A549 cells
Extracted molecule total RNA
Label Cy5
 
 
Description Control sample from A549 cells was labelled in Cy5 and hybridized against Cobalt sample labelled in Cy3
Data processing Ratios (test/control) were normalized towards the mean ratio of the microarray then converted to base-2 logarithms
 
Submission date Sep 19, 2006
Last update date Sep 21, 2006
Contact name Bérenguer Frédéric
E-mail(s) [email protected]
Organization name CEA/DSV
Department SBTN
Street address BP17171
City bagnols sur ceze
ZIP/Postal code 30207
Country France
 
Platform ID GPL4263
Series (1)
GSE5892 Gene expression profile of human lung cell line (A549) treated with 2mM 59cobalt chloride during 30mn, 2h, 4h and 24h

Data table header descriptions
ID_REF
VALUE log2-transformed normalized ratio (test/control)
F635 Median - B635 Median feature pixel intensity of 635 after local subtraction of background
F532 Median - B532 Median feature pixel intensity of 532 after local subtraction of background
Flags Flags indicating the quality of scanner quantification
Ratio (635/532) Normalized ratio (635/532)

Data table
ID_REF VALUE F635 Median - B635 F532 Median - B532 Flags Ratio (635/532)
1.1.1 1.80735 4 14 0 0.285714285714286
1.2.1 0.793549 15 26 0 0.576923076923077
1.3.1 -0.315993 849 682 0 1.24486803519062
1.4.1 1.65208 7 22 0 0.318181818181818
1.5.1 0.429684 49 66 0 0.742424242424242
1.6.1 0.184425 22 25 0 0.88
1.7.1 -0.377934 1497 1152 0 1.29947916666667
1.8.1 0.152003 81 90 0 0.9
1.9.1 0.169925 32 36 0 0.888888888888889
1.10.1 2.08746 4 17 0 0.235294117647059
1.11.1 0.643856 16 25 0 0.64
1.12.1 -0.426815 164 122 0 1.34426229508197
1.13.1 -0.39965 715 542 0 1.31918819188192
1.14.1 0.364997 66 85 0 0.776470588235294
1.15.1 0.443607 25 34 0 0.735294117647059
1.16.1 -0.142958 159 144 0 1.10416666666667
1.1.2 1.24793 8 19 0 0.421052631578947
1.2.2 0.0123133 700 706 0 0.991501416430595
1.3.2 -0.179996 1168 1031 0 1.13288069835112
1.4.2 1.76553 5 17 0 0.294117647058824

Total number of rows: 8960

Table truncated, full table size 360 Kbytes.




Supplementary data files not provided

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