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Sample GSM136946 Query DataSets for GSM136946
Status Public on Sep 22, 2006
Title A549 cell line – exposure 1 Cobalt 2mM – 2h
Sample type RNA
 
Channel 1
Source name A549 cell line – 0mM Cobalt – 2h
Organism Homo sapiens
Characteristics Control sample from A549 cells
Extracted molecule total RNA
Label Cy3
 
Channel 2
Source name A549 cell line – 2mM Cobalt – 2h
Organism Homo sapiens
Characteristics Cobalt sample from A549 cells
Extracted molecule total RNA
Label Cy5
 
 
Description Control sample from A549 cells was labelled in Cy3 and hybridized against Cobalt sample labelled in Cy5
Data processing Ratios (test/control) were normalized towards the mean ratio of the microarray then converted to base-2 logarithms
 
Submission date Sep 21, 2006
Last update date Sep 21, 2006
Contact name Bérenguer Frédéric
E-mail(s) [email protected]
Organization name CEA/DSV
Department SBTN
Street address BP17171
City bagnols sur ceze
ZIP/Postal code 30207
Country France
 
Platform ID GPL4263
Series (1)
GSE5892 Gene expression profile of human lung cell line (A549) treated with 2mM 59cobalt chloride during 30mn, 2h, 4h and 24h

Data table header descriptions
ID_REF
VALUE log2-transformed normalized ratio (test/control)
F635 Median - B635 Median feature pixel intensity of 635 after local subtraction of background
F532 Median - B532 Median feature pixel intensity of 532 after local subtraction of background
Flags Flags indicating the quality of scanner quantification
Ratio (635/532) Normalized ratio (635/532)

Data table
ID_REF VALUE F635 Median - B635 F532 Median - B532 Flags Ratio (635/532)
1.1.1 1.07240849552805 143 68 0 2.10294117647059
1.2.1 -0.652076696579693 14 22 0 0.636363636363636
1.3.1 0.057891535141739 6356 6106 0 1.04094333442516
1.4.1 -60 16 -100 -3.75
1.5.1 0.468279520555823 184 133 0 1.38345864661654
1.6.1 1.5190745650647 321 112 0 2.86607142857143
1.7.1 -0.165664816368433 6180 6932 0 0.891517599538373
1.8.1 0.67863011562101 517 323 0 1.60061919504644
1.9.1 2.56071495447448 177 30 0 5.9
1.10.1 -120 -23 -100 5.21739130434783
1.11.1 33 -7 -100 -4.71428571428571
1.12.1 -0.278716028066063 793 962 0 0.824324324324324
1.13.1 -0.0353792874164695 5035 5160 0 0.97577519379845
1.14.1 0.29926749747619 379 308 0 1.23051948051948
1.15.1 -0.206450877467426 13 15 0 0.866666666666667
1.16.1 -0.0858471806113767 1419 1506 0 0.942231075697211
1.1.2 0.659659867998757 109 69 0 1.57971014492754
1.2.2 -0.172598640163205 4792 5401 0 0.88724310312905
1.3.2 -0.20600656115936 5629 6493 0 0.866933620822424
1.4.2 -63 39 -100 -1.61538461538462

Total number of rows: 8960

Table truncated, full table size 450 Kbytes.




Supplementary data files not provided

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