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Sample GSM1379504 Query DataSets for GSM1379504
Status Public on May 07, 2014
Title female adults replicate 2 [mRNA]
Sample type RNA
 
Source name female Drosophila adults
Organism Drosophila melanogaster
Characteristics Sex: female
developmental stage: adults
Treatment protocol Flies laid in staggered vials and larvae, pupae and adults samples collected at the same time from vials at the right stage of development. 10 individuals included in each biological replicate collected.
Growth protocol LHm outbred population kept at 25oC
Extracted molecule total RNA
Extraction protocol ambion miRvana total RNA extraction kit used according to manufacturer's protocol
Label biotin
Label protocol Affymetrix One-Cycle Target Labeling (Expression Analysis Technical Manual, 2001, Affymetrix).
 
Hybridization protocol Affymetrix One-Cycle Target Labeling (Expression Analysis Technical Manual, 2001, Affymetrix).
Scan protocol Affymetrix One-Cycle Target Labeling (Expression Analysis Technical Manual, 2001, Affymetrix).
Description gene expression data from LHm outbred population
Data processing RMA standard
 
Submission date May 06, 2014
Last update date May 07, 2014
Contact name Fiona C Ingleby
Organization name University of Sussex
Department School of Biology
Street address John Maynard Smith Building
City Falmer
ZIP/Postal code BN1 9QG
Country United Kingdom
 
Platform ID GPL1322
Series (2)
GSE57320 Sex-specific mRNA and miRNA expression data from Drosophila larvae, pupae and adults [mRNA]
GSE57322 Sex-specific mRNA and miRNA expression data from Drosophila larvae, pupae and adults

Data table header descriptions
ID_REF
VALUE As provided by affy package, R 3.0.2, Bioconductor 2.2

Data table
ID_REF VALUE
1616608_a_at 12.23474118
1622892_s_at 8.798513747
1622893_at 11.57073561
1622894_at 6.667909205
1622895_at 9.586622229
1622896_at 7.902326462
1622897_at 5.556826781
1622898_a_at 10.42983077
1622899_at 5.445746073
1622900_at 3.788165046
1622901_at 6.668536653
1622902_at 7.816917963
1622903_s_at 9.192115436
1622904_at 6.277225083
1622905_at 4.439302319
1622906_at 10.33110393
1622907_at 8.795139671
1622908_a_at 6.636291151
1622909_at 10.55648282
1622910_at 3.983717428

Total number of rows: 18952

Table truncated, full table size 432 Kbytes.




Supplementary file Size Download File type/resource
GSM1379504_AF2.M.CEL.gz 1.9 Mb (ftp)(http) CEL
Processed data included within Sample table

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