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Sample GSM158133 Query DataSets for GSM158133
Status Public on Apr 23, 2007
Title BALB-RAG_PBS Replicate 2
Sample type RNA
 
Source name mouse whole lung
Organism Mus musculus
Characteristics 8 wk old BALB/c (or BALB-RAG) mice were sensitized to ovalbumin (or PBS)]on days 1 and 7, and challenged with aerosolized ovalbumin (or PBS) on days 15-21, and samples harvested on day 22
Extracted molecule total RNA
Extraction protocol RNA was isolated using TRIZOL reagent (Gibco-BRL Life Technologies) according to the manufacturers protocol
Label biotin
Label protocol Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 6 microg total RNA (Expression Analysis Technical Manual, 2001, Affymetrix).
 
Hybridization protocol Following fragmentation, 10 microg of cRNA were hybridized for 16 hr at 45C on rat RAE-230A microrray gene chips. GeneChips were washed and stained in the Affymetrix Fluidics Station 400.
Scan protocol GeneChips were scanned using the Hewlett-Packard GeneArray Scanner G2500A.
Description gene expression from allergen stimulated mouse lung
Data processing GCRMA
 
Submission date Jan 24, 2007
Last update date Aug 28, 2018
Contact name Xin Lu
E-mail(s) [email protected]
Phone 847-937-7942
Organization name Abbott Laboratories
Department Cancer Research
Lab Cancer Genomics
Street address 100 Abbott Park Rd
City Abbott Park
State/province IL
ZIP/Postal code 60064
Country USA
 
Platform ID GPL1261
Series (1)
GSE6858 Expression data from experimental murine asthma
Relations
Reanalyzed by GSE119085

Data table header descriptions
ID_REF Affymetrix Probe_set ID
VALUE expression levels

Data table
ID_REF VALUE
AFFX-BioB-5_at 359.1040708
AFFX-BioB-M_at 625.8120018
AFFX-BioB-3_at 1222.878713
AFFX-BioC-5_at 139.4854818
AFFX-BioC-3_at 228.417173
AFFX-BioDn-5_at 181.8509275
AFFX-BioDn-3_at 744.0725362
AFFX-CreX-5_at 348.0704998
AFFX-CreX-3_at 538.2923734
AFFX-DapX-5_at 1102.567401
AFFX-DapX-M_at 209.1721872
AFFX-DapX-3_at 232.1197786
AFFX-LysX-5_at 347.5856245
AFFX-LysX-M_at 483.7978565
AFFX-LysX-3_at 196.7848797
AFFX-PheX-5_at 118.5867609
AFFX-PheX-M_at 616.2662431
AFFX-PheX-3_at 2368.613551
AFFX-ThrX-5_at 543.180049
AFFX-ThrX-M_at 106.0243595

Total number of rows: 45101

Table truncated, full table size 1026 Kbytes.




Supplementary file Size Download File type/resource
GSM158133.cel.gz 5.9 Mb (ftp)(http) CEL

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