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Sample GSM172155 Query DataSets for GSM172155
Status Public on Jul 02, 2007
Title Developmental regulation of the transcriptome of chicken retinal pigment epithelium (E7 replicate 2)
Sample type RNA
 
Source name Retinal Pigment Epithelium
Organism Gallus gallus
Characteristics Isolated from chicken embryos on embryoinic day 7
Extracted molecule total RNA
Extraction protocol RNeasy Protect kit (Qiagen)
Label biotin-UTP
Label protocol affymetrix 3'-amplification ivt
 
Hybridization protocol Affymetrix standard protocol
Scan protocol Affymetrix standard protocol
Description E7, replicate 2
Data processing signal value generated from global scaling
 
Submission date Feb 27, 2007
Last update date Jul 02, 2007
Contact name Lawrence J Rizzolo
E-mail(s) [email protected]
Organization name Yale University
Department Dept of Surgery
Street address 333 Cedar St
City New Haven
State/province CT
ZIP/Postal code 06511
Country USA
 
Platform ID GPL3213
Series (1)
GSE7176 Develomental Time Course of the Retinal Pigment Epithelial Transcriptome

Data table header descriptions
ID_REF
VALUE Signal
ABS_CALL Detection
DETECTION P-VALUE Detection p-value

Data table
ID_REF VALUE ABS_CALL DETECTION P-VALUE
AFFX-BioB-5_at 512.518 P 0.000389797
AFFX-BioB-M_at 672.193 P 4.42873e-05
AFFX-BioB-3_at 528.915 P 5.16732e-05
AFFX-BioC-5_at 1684.82 P 6.02111e-05
AFFX-BioC-3_at 1751.29 P 4.42873e-05
AFFX-BioDn-5_at 3582.55 P 4.42873e-05
AFFX-BioDn-3_at 7304.11 P 8.14279e-05
AFFX-CreX-5_at 18490.8 P 5.16732e-05
AFFX-CreX-3_at 23495 P 4.42873e-05
AFFX-DapX-5_at 26.7477 A 0.455413
AFFX-DapX-M_at 33.0185 A 0.455413
AFFX-DapX-3_at 32.3109 A 0.544587
AFFX-LysX-5_at 15.2832 A 0.51489
AFFX-LysX-M_at 11.719 A 0.876428
AFFX-LysX-3_at 9.52973 A 0.41138
AFFX-PheX-5_at 13.0051 A 0.712257
AFFX-PheX-M_at 2.23625 A 0.997444
AFFX-PheX-3_at 36.4351 A 0.529762
AFFX-ThrX-5_at 6.05088 A 0.973889
AFFX-ThrX-M_at 25.3138 A 0.672921

Total number of rows: 38535

Table truncated, full table size 1491 Kbytes.




Supplementary file Size Download File type/resource
GSM172155.CEL.gz 3.6 Mb (ftp)(http) CEL
Processed data included within Sample table

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