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Sample GSM1742 Query DataSets for GSM1742
Status Public on Jun 07, 2002
Title CF-1 wild-type 2month
Sample type RNA
 
Source name mouse ovary CF-1 wild type
Organism Mus musculus
Extracted molecule total RNA
 
Description Wild type ovary sample from 2 month old CF-1 mice for use in gene expression profiling experiment with LH hypersecreting mice (LHCTP)
 
Submission date Jun 05, 2002
Last update date May 27, 2005
Contact name John H Nilson
E-mail(s) [email protected]
Phone 216-368-4497
Organization name Case Western Reserve University, School of Medicine
Department Pharmacology
Lab Nilson
Street address 2109 Adelbert Road
City Cleveland
State/province OH
ZIP/Postal code 44106
Country USA
 
Platform ID GPL75
Series (1)
GSE499 Granulosa cell tumorigenesis

Data table header descriptions
ID_REF
Positive positive probe pair
Negative negative probe pair
Pairs pairs
Pairs Used pairs used
Pairs InAvg pairs used in average
Pos Fraction positive probe pairs/total probe pairs
Log Avg log average ratio
Pos/Neg pos/neg
VALUE average difference
ABS_CALL present or absent or marginal

Data table
ID_REF Positive Negative Pairs Pairs Used Pairs InAvg Pos Fraction Log Avg Pos/Neg VALUE ABS_CALL
IL2_at 2 4 19 19 17 0.11 -0.17 0.5 -224.7 A
IL10_at 7 5 20 20 17 0.35 0.58 1.4 147.6 A
GMCSF_at 4 8 20 20 18 0.2 -0.78 0.5 -406.6 A
TNFRII_at 6 4 20 20 18 0.3 0.88 1.5 106.7 A
MIP1-B_at 9 4 20 20 18 0.45 0.74 2.3 574.2 A
IL4_at 10 5 20 20 19 0.5 1.87 2 128 A
IL12_P40_at 5 6 20 20 19 0.25 0.1 0.8 -235.1 A
TNFa_at 6 6 20 20 19 0.3 -0.83 1 -136.3 A
TCRa_at 3 11 20 20 19 0.15 -1.46 0.3 -623 A
AFFX-BioB-5_at 10 4 20 20 19 0.5 1.91 2.5 928.8 A
AFFX-BioB-M_at 13 2 20 20 18 0.65 3.04 6.5 923.8 P
AFFX-BioB-3_at 11 5 20 20 20 0.55 2.21 2.2 1227.8 A
AFFX-BioC-5_at 18 0 20 20 19 0.9 5.47 Undef 3820.3 P
AFFX-BioC-3_at 17 0 20 20 20 0.85 4.97 Undef 4541.9 P
AFFX-BioDn-5_at 17 2 20 20 20 0.85 4.93 8.5 2906.4 P
AFFX-BioDn-3_at 17 0 20 20 20 0.85 5.76 Undef 12865.2 P
AFFX-CreX-5_at 19 0 20 20 20 0.95 8.01 Undef 24876.3 P
AFFX-CreX-3_at 18 0 20 20 20 0.9 7.27 Undef 26051.7 P
AFFX-BioB-5_st 10 6 20 20 18 0.5 0.32 1.7 -248.2 A
AFFX-BioB-M_st 8 7 20 20 18 0.4 -0.01 1.1 -198.2 A

Total number of rows: 6584

Table truncated, full table size 309 Kbytes.




Supplementary data files not provided
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