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Sample GSM1826517 Query DataSets for GSM1826517
Status Public on Dec 31, 2015
Title fibroblast_BRCA1mosMe_2
Sample type RNA
 
Source name fibroblast_BRCA1mosMe
Organism Homo sapiens
Characteristics disease: cancers
tissue: dermal fibroblast, untreated
Treatment protocol untreated
Growth protocol grown in DMEM + 10% FCS to subconfluency
Extracted molecule total RNA
Extraction protocol TriZol RNA extraction
Label biotin
Label protocol conducted by Affymetrix company
 
Hybridization protocol conducted by Affymetrix company
Scan protocol conducted by Affymetrix company
Data processing The data were analyzed with Affymetrix Expression Console with RMA normalization.
 
Submission date Jul 20, 2015
Last update date Dec 31, 2015
Contact name Anna Etzold
Organization name Universität Mainz
Street address Langenbeckstr. 1
City Mainz
State/province Germany (Deutschland)
ZIP/Postal code 55131
Country Germany
 
Platform ID GPL13667
Series (1)
GSE71078 Comparative expression analysis of BRCA1mosMe fibroblast vs. BRCA1wt fibroblasts

Data table header descriptions
ID_REF
VALUE log2-rma

Data table
ID_REF VALUE
AFFX-DapX-5_at 5.9073
AFFX-DapX-M_at 7.90876
AFFX-DapX-3_at 9.12786
AFFX-LysX-5_at 4.39839
AFFX-LysX-M_at 5.62586
AFFX-LysX-3_at 6.74913
AFFX-PheX-5_at 5.53094
AFFX-PheX-M_at 6.03974
AFFX-PheX-3_at 5.55632
AFFX-ThrX-5_at 4.59328
AFFX-ThrX-M_at 5.62235
AFFX-ThrX-3_at 7.03963
AFFX-TrpnX-5_at 3.1961
AFFX-TrpnX-M_at 3.43569
AFFX-TrpnX-3_at 3.03079
AFFX-r2-Ec-bioB-5_at 6.79834
AFFX-r2-Ec-bioB-M_at 7.27963
AFFX-r2-Ec-bioB-3_at 7.21674
AFFX-r2-Ec-bioC-5_at 8.95059
AFFX-r2-Ec-bioC-3_at 8.82288

Total number of rows: 49386

Table truncated, full table size 1033 Kbytes.




Supplementary file Size Download File type/resource
GSM1826517_A24ctrl2.ga.cel.gz 2.2 Mb (ftp)(http) CEL
GSM1826517_A24ctrl2.ga.rma.chp.gz 344.2 Kb (ftp)(http) CHP
Processed data included within Sample table
Processed data provided as supplementary file

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