NCBI Logo
GEO Logo
   NCBI > GEO > Accession DisplayHelp Not logged in | LoginHelp
GEO help: Mouse over screen elements for information.
          Go
Sample GSM19244 Query DataSets for GSM19244
Status Public on Mar 28, 2004
Title Mouse Kidney Male 3 (technical replicate)
Sample type RNA
 
Source name Mouse Kidney
Organism Mus musculus
Extracted molecule total RNA
 
Description Triple selected polyA RNA for liver, kidney, ovary,
testis, was obtained from Ambion (Austin, TX). Total
RNA was obtained form Ambion for hypothalamus samples.
All RNA samples had an agilent ratio greater
than 1 indicating that degradation had not occurred.
All RNA samples were prepared from a pool of 10
different animals. The total RNA samples were
labeled for hybridization onto the microarray according
to affymetrix protocols listed at:
http://keck.med.yale.edu/affymetrix/protocols
Keywords = Sex Specific Transcription, Mouse, Affymetrix, Healthy Mammalian Tissue
 
Submission date Mar 26, 2004
Last update date May 27, 2005
Contact name Joel Rozowsky
E-mail(s) [email protected]
Phone 203-432-5405
Organization name Yale University
Department Molecular Biophysics & Biochemistry
Lab Gerstein Lab
Street address 266 Whitney Ave, Bass 437
City New Haven
State/province CT
ZIP/Postal code 06520
Country USA
 
Platform ID GPL339
Series (1)
GSE1148 Sex Specific Transciption in Mouse Tissues

Data table header descriptions
ID_REF
VALUE MAS 5.0 Intensity
ABS_CALL the call in an absolute analysis that indicates if the transcript was present (P), absent (A), marginal (M), or no call (NC)
DETECTION P-VALUE 'detection p-value', p-value that indicates the significance level of the detection call

Data table
ID_REF VALUE ABS_CALL DETECTION P-VALUE
AFFX-BioB-5_at 187.2 P 0.013811
AFFX-BioB-M_at 271.8 P 0.001796
AFFX-BioB-3_at 153.5 P 0.010317
AFFX-BioC-5_at 504.0 P 0.000169
AFFX-BioC-3_at 346.9 P 0.000095
AFFX-BioDn-5_at 371.1 P 0.000095
AFFX-BioDn-3_at 3011.5 P 0.000446
AFFX-CreX-5_at 3536.5 P 0.000044
AFFX-CreX-3_at 6311.7 P 0.000044
AFFX-DapX-5_at 25.8 A 0.195266
AFFX-DapX-M_at 44.3 M 0.058444
AFFX-DapX-3_at 5.5 A 0.760937
AFFX-LysX-5_at 3.8 A 0.529760
AFFX-LysX-M_at 6.4 A 0.860518
AFFX-LysX-3_at 4.2 A 0.645547
AFFX-PheX-5_at 14.4 A 0.772364
AFFX-PheX-M_at 7.5 A 0.712257
AFFX-PheX-3_at 34.4 A 0.455413
AFFX-ThrX-5_at 7.9 A 0.824672
AFFX-ThrX-M_at 25.6 A 0.313723

Total number of rows: 22690

Table truncated, full table size 628 Kbytes.




Supplementary data files not provided

| NLM | NIH | GEO Help | Disclaimer | Accessibility |
NCBI Home NCBI Search NCBI SiteMap