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Sample GSM19249 Query DataSets for GSM19249
Status Public on Mar 28, 2004
Title Mouse Kidney Female 3
Sample type RNA
 
Source name Mouse Kidney
Organism Mus musculus
Extracted molecule total RNA
 
Description Triple selected polyA RNA for liver, kidney, ovary,
testis, was obtained from Ambion (Austin, TX). Total
RNA was obtained form Ambion for hypothalamus samples.
All RNA samples had an agilent ratio greater
than 1 indicating that degradation had not occurred.
All RNA samples were prepared from a pool of 10
different animals. The total RNA samples were
labeled for hybridization onto the microarray according
to affymetrix protocols listed at:
http://keck.med.yale.edu/affymetrix/protocols
Keywords = Sex Specific Transcription, Mouse, Affymetrix, Healthy Mammalian Tissue
 
Submission date Mar 26, 2004
Last update date May 27, 2005
Contact name Joel Rozowsky
E-mail(s) [email protected]
Phone 203-432-5405
Organization name Yale University
Department Molecular Biophysics & Biochemistry
Lab Gerstein Lab
Street address 266 Whitney Ave, Bass 437
City New Haven
State/province CT
ZIP/Postal code 06520
Country USA
 
Platform ID GPL339
Series (1)
GSE1148 Sex Specific Transciption in Mouse Tissues

Data table header descriptions
ID_REF
VALUE MAS 5.0 Intensity
ABS_CALL the call in an absolute analysis that indicates if the transcript was present (P), absent (A), marginal (M), or no call (NC)
DETECTION P-VALUE 'detection p-value', p-value that indicates the significance level of the detection call

Data table
ID_REF VALUE ABS_CALL DETECTION P-VALUE
AFFX-BioB-5_at 221.7 P 0.006187
AFFX-BioB-M_at 358.6 P 0.001102
AFFX-BioB-3_at 179.5 P 0.006871
AFFX-BioC-5_at 604.0 P 0.000147
AFFX-BioC-3_at 393.0 P 0.000169
AFFX-BioDn-5_at 439.2 P 0.000127
AFFX-BioDn-3_at 3255.0 P 0.000340
AFFX-CreX-5_at 3637.5 P 0.000044
AFFX-CreX-3_at 6217.9 P 0.000044
AFFX-DapX-5_at 33.3 A 0.095667
AFFX-DapX-M_at 40.5 A 0.147939
AFFX-DapX-3_at 19.2 A 0.699394
AFFX-LysX-5_at 3.4 A 0.794268
AFFX-LysX-M_at 15.4 A 0.544587
AFFX-LysX-3_at 12.1 A 0.313723
AFFX-PheX-5_at 3.7 A 0.876428
AFFX-PheX-M_at 4.7 A 0.772364
AFFX-PheX-3_at 58.0 A 0.313723
AFFX-ThrX-5_at 8.4 A 0.834139
AFFX-ThrX-M_at 25.5 A 0.368438

Total number of rows: 22690

Table truncated, full table size 629 Kbytes.




Supplementary data files not provided

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