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Sample GSM19251 Query DataSets for GSM19251
Status Public on Mar 28, 2004
Title Mouse Testis 1
Sample type RNA
 
Source name Mouse Testis
Organism Mus musculus
Extracted molecule total RNA
 
Description Triple selected polyA RNA for liver, kidney, ovary,
testis, was obtained from Ambion (Austin, TX). Total
RNA was obtained form Ambion for hypothalamus samples.
All RNA samples had an agilent ratio greater
than 1 indicating that degradation had not occurred.
All RNA samples were prepared from a pool of 10
different animals. The total RNA samples were
labeled for hybridization onto the microarray according
to affymetrix protocols listed at:
http://keck.med.yale.edu/affymetrix/protocols
Keywords = Sex Specific Transcription, Mouse, Affymetrix, Healthy Mammalian Tissue
 
Submission date Mar 26, 2004
Last update date May 27, 2005
Contact name Joel Rozowsky
E-mail(s) [email protected]
Phone 203-432-5405
Organization name Yale University
Department Molecular Biophysics & Biochemistry
Lab Gerstein Lab
Street address 266 Whitney Ave, Bass 437
City New Haven
State/province CT
ZIP/Postal code 06520
Country USA
 
Platform ID GPL339
Series (1)
GSE1148 Sex Specific Transciption in Mouse Tissues

Data table header descriptions
ID_REF
VALUE MAS 5.0 Intensity
ABS_CALL the call in an absolute analysis that indicates if the transcript was present (P), absent (A), marginal (M), or no call (NC)
DETECTION P-VALUE 'detection p-value', p-value that indicates the significance level of the detection call

Data table
ID_REF VALUE ABS_CALL DETECTION P-VALUE
AFFX-BioB-5_at 255.0 P 0.023929
AFFX-BioB-M_at 305.2 P 0.000972
AFFX-BioB-3_at 158.4 P 0.009337
AFFX-BioC-5_at 567.4 P 0.000297
AFFX-BioC-3_at 332.0 P 0.000857
AFFX-BioDn-5_at 397.8 P 0.000857
AFFX-BioDn-3_at 2976.1 P 0.000509
AFFX-CreX-5_at 3838.3 P 0.000044
AFFX-CreX-3_at 6887.6 P 0.000044
AFFX-DapX-5_at 36.5 A 0.123572
AFFX-DapX-M_at 27.2 A 0.327079
AFFX-DapX-3_at 3.3 A 0.976081
AFFX-LysX-5_at 16.4 A 0.485110
AFFX-LysX-M_at 20.6 A 0.699394
AFFX-LysX-3_at 31.2 A 0.185131
AFFX-PheX-5_at 9.2 A 0.749204
AFFX-PheX-M_at 26.1 A 0.686277
AFFX-PheX-3_at 24.4 A 0.485110
AFFX-ThrX-5_at 10.4 A 0.824672
AFFX-ThrX-M_at 32.6 A 0.275146

Total number of rows: 22690

Table truncated, full table size 629 Kbytes.




Supplementary data files not provided

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