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Sample GSM19255 Query DataSets for GSM19255
Status Public on Mar 28, 2004
Title Mouse Testis 3
Sample type RNA
 
Source name Mouse Testis
Organism Mus musculus
Extracted molecule total RNA
 
Description Triple selected polyA RNA for liver, kidney, ovary,
testis, was obtained from Ambion (Austin, TX). Total
RNA was obtained form Ambion for hypothalamus samples.
All RNA samples had an agilent ratio greater
than 1 indicating that degradation had not occurred.
All RNA samples were prepared from a pool of 10
different animals. The total RNA samples were
labeled for hybridization onto the microarray according
to affymetrix protocols listed at:
http://keck.med.yale.edu/affymetrix/protocols
Keywords = Sex Specific Transcription, Mouse, Affymetrix, Healthy Mammalian Tissue
 
Submission date Mar 26, 2004
Last update date May 27, 2005
Contact name Joel Rozowsky
E-mail(s) [email protected]
Phone 203-432-5405
Organization name Yale University
Department Molecular Biophysics & Biochemistry
Lab Gerstein Lab
Street address 266 Whitney Ave, Bass 437
City New Haven
State/province CT
ZIP/Postal code 06520
Country USA
 
Platform ID GPL339
Series (1)
GSE1148 Sex Specific Transciption in Mouse Tissues

Data table header descriptions
ID_REF
VALUE MAS 5.0 Intensity
ABS_CALL the call in an absolute analysis that indicates if the transcript was present (P), absent (A), marginal (M), or no call (NC)
DETECTION P-VALUE 'detection p-value', p-value that indicates the significance level of the detection call

Data table
ID_REF VALUE ABS_CALL DETECTION P-VALUE
AFFX-BioB-5_at 193.2 P 0.009337
AFFX-BioB-M_at 319.3 P 0.000754
AFFX-BioB-3_at 164.1 P 0.002867
AFFX-BioC-5_at 506.0 P 0.000195
AFFX-BioC-3_at 392.5 P 0.000127
AFFX-BioDn-5_at 533.2 P 0.000110
AFFX-BioDn-3_at 2616.1 P 0.000225
AFFX-CreX-5_at 4843.7 P 0.000044
AFFX-CreX-3_at 7827.5 P 0.000044
AFFX-DapX-5_at 20.2 A 0.156732
AFFX-DapX-M_at 24.0 A 0.139482
AFFX-DapX-3_at 4.4 A 0.897835
AFFX-LysX-5_at 3.6 A 0.916408
AFFX-LysX-M_at 5.2 A 0.772364
AFFX-LysX-3_at 21.9 A 0.216524
AFFX-PheX-5_at 3.0 A 0.921998
AFFX-PheX-M_at 34.9 A 0.559354
AFFX-PheX-3_at 11.7 A 0.659339
AFFX-ThrX-5_at 6.6 A 0.876428
AFFX-ThrX-M_at 25.6 A 0.514890

Total number of rows: 22690

Table truncated, full table size 628 Kbytes.




Supplementary data files not provided

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