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Sample GSM19260 Query DataSets for GSM19260
Status Public on Mar 28, 2004
Title Mouse Ovary 2 (technical replicate)
Sample type RNA
 
Source name Mouse Ovary
Organism Mus musculus
Extracted molecule total RNA
 
Description Triple selected polyA RNA for liver, kidney, ovary,
testis, was obtained from Ambion (Austin, TX). Total
RNA was obtained form Ambion for hypothalamus samples.
All RNA samples had an agilent ratio greater
than 1 indicating that degradation had not occurred.
All RNA samples were prepared from a pool of 10
different animals. The total RNA samples were
labeled for hybridization onto the microarray according
to affymetrix protocols listed at:
http://keck.med.yale.edu/affymetrix/protocols
Keywords = Sex Specific Transcription, Mouse, Affymetrix, Healthy Mammalian Tissue
 
Submission date Mar 26, 2004
Last update date May 27, 2005
Contact name Joel Rozowsky
E-mail(s) [email protected]
Phone 203-432-5405
Organization name Yale University
Department Molecular Biophysics & Biochemistry
Lab Gerstein Lab
Street address 266 Whitney Ave, Bass 437
City New Haven
State/province CT
ZIP/Postal code 06520
Country USA
 
Platform ID GPL339
Series (1)
GSE1148 Sex Specific Transciption in Mouse Tissues

Data table header descriptions
ID_REF
VALUE MAS 5.0 Intensity
ABS_CALL the call in an absolute analysis that indicates if the transcript was present (P), absent (A), marginal (M), or no call (NC)
DETECTION P-VALUE 'detection p-value', p-value that indicates the significance level of the detection call

Data table
ID_REF VALUE ABS_CALL DETECTION P-VALUE
AFFX-BioB-5_at 200.9 P 0.023929
AFFX-BioB-M_at 281.6 P 0.001593
AFFX-BioB-3_at 147.3 P 0.009337
AFFX-BioC-5_at 507.8 P 0.000225
AFFX-BioC-3_at 319.5 P 0.000297
AFFX-BioDn-5_at 332.4 P 0.000258
AFFX-BioDn-3_at 2619.7 P 0.000509
AFFX-CreX-5_at 3282.6 P 0.000044
AFFX-CreX-3_at 6301.2 P 0.000044
AFFX-DapX-5_at 30.6 A 0.175328
AFFX-DapX-M_at 45.6 A 0.067678
AFFX-DapX-3_at 7.9 A 0.834139
AFFX-LysX-5_at 4.7 A 0.672921
AFFX-LysX-M_at 8.2 A 0.749204
AFFX-LysX-3_at 26.0 A 0.175328
AFFX-PheX-5_at 6.3 A 0.814869
AFFX-PheX-M_at 18.3 A 0.712257
AFFX-PheX-3_at 67.5 A 0.227636
AFFX-ThrX-5_at 16.7 A 0.617401
AFFX-ThrX-M_at 21.4 A 0.396920

Total number of rows: 22690

Table truncated, full table size 631 Kbytes.




Supplementary data files not provided

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