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GEO accession:
Sample GSM206585
Query DataSets for GSM206585
Status
Public on Jun 30, 2007
Title
NB_bld_1266
Sample type
genomic
Source name
matched blood
Organism
Homo sapiens
Characteristics
matched blood
Extracted molecule
genomic DNA
Extraction protocol
Quiagen DNA extraction protocol
Label
biotin
Label protocol
Affymetrix SNP array protocol
Hybridization protocol
Affymetrix SNP array protocol
Scan protocol
Hewlett-Packard scanner
Description
1266B
Data processing
Affymetrix Gene chip 5.0 and www.dchipSNP.org (Cheng Li)
Submission date
Jun 29, 2007
Last update date
Aug 14, 2011
Contact name
Rani E. George
E-mail(s)
[email protected]
Phone
6176325281
Organization name
Dana-Farber Cancer Institute
Department
Pediatric Oncology
Lab
A. Thomas Look
Street address
Dana 322, 44 Binney St
City
Boston
State/province
MA
ZIP/Postal code
02115
Country
USA
Platform ID
GPL2641
Series (1)
GSE8333
SNP array analysis of neuroblastoma tumors
Data table header descriptions
ID_REF
Signal
VALUE
LOH calls
Data table
ID_REF
Signal
VALUE
AFFX-5Q-123
11291
NoCall
AFFX-5Q-456
9473.87
NoCall
AFFX-5Q-789
10778.2
NoCall
AFFX-5Q-ABC
13167.7
NoCall
SNP_A-1513509
2764
AB
SNP_A-1518411
11194.7
NoCall
SNP_A-1511066
5630.23
A
SNP_A-1517367
2231.29
A
SNP_A-1512567
4920.8
B
SNP_A-1519604
3051.33
A
SNP_A-1507932
2186.12
AB
SNP_A-1519685
4028.3
B
SNP_A-1516165
3642.24
B
SNP_A-1514890
3323.23
B
SNP_A-1507580
2358.96
B
SNP_A-1510991
4207.42
AB
SNP_A-1516205
3707.28
A
SNP_A-1512666
2492.58
B
SNP_A-1512740
6229.9
B
SNP_A-1512132
2652.04
A
Total number of rows:
10208
Table truncated, full table size
242 Kbytes
.
Supplementary file
Size
Download
File type/resource
GSM206585.CEL.gz
3.1 Mb
(ftp)
(http)
CEL
GSM206585.TXT.gz
317.2 Kb
(ftp)
(http)
TXT
Processed data included within Sample table
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