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Sample GSM207981 Query DataSets for GSM207981
Status Public on Oct 02, 2007
Title Human cancer, melanoma metastasis (Met Nr 67/4)
Sample type RNA
 
Source name melanoma clinical sample
Organism Homo sapiens
Characteristics Genotype: melanoma metastasis
Age: none
Treatment protocol n/a
Growth protocol n/a
Extracted molecule total RNA
Extraction protocol Rneasy mini kit
Label biotin
Label protocol Biotinylated cRNA were prepared according to the standard Affymetrix protocol (701025, Revision 3).
 
Hybridization protocol Following fragmentation, 15 ug of cRNA were hybridized on one U133A human chip and one test chip. GeneChips were washed and stained in the Affymetrix Fluidics Station 400.
Scan protocol GeneChips were scanned using the Hewlett-Packard GeneArray Scanner G2500A.
Description human clinical tumor tissue sample
Data processing raw data (CEL file) were normalized with RMA and further analyzied with GenePatter comparative marker selection module.
 
Submission date Jul 06, 2007
Last update date Aug 14, 2011
Contact name steve shen
E-mail(s) [email protected]
Organization name MIT
Street address 77 mass ave
City cambridge
State/province MA
ZIP/Postal code 02139
Country USA
 
Platform ID GPL96
Series (1)
GSE8401 Gene Signature for Aggression of Melanoma Metastases - Melanoma Metastasis

Data table header descriptions
ID_REF
VALUE RMA normalized

Data table
ID_REF VALUE
1007_s_at 182.1125
1053_at 71.741295
117_at 56.01339
121_at 407.95963
1255_g_at 12.278797
1294_at 204.7386
1316_at 39.73364
1320_at 5.104669
1405_i_at 579.4489
1431_at 26.76502
1438_at 55.5995
1487_at 159.07253
1494_f_at 86.36548
1598_g_at 513.778
160020_at 362.7074
1729_at 236.1944
1773_at 94.36739
177_at 32.9734
179_at 317.1793
1861_at 72.845

Total number of rows: 22283

Table truncated, full table size 447 Kbytes.




Supplementary file Size Download File type/resource
GSM207981.CEL.gz 3.4 Mb (ftp)(http) CEL
Processed data included within Sample table

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