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Sample GSM2200288 Query DataSets for GSM2200288
Status Public on May 15, 2019
Title N265Quit_16wk
Sample type RNA
 
Source name Nasal Epithelium
Organism Homo sapiens
Characteristics tissue: nasal epithelium
patient id: N265
time in weeks: 16
rna integrity number (rin): 3.2
age: 57
gender: M
Extracted molecule total RNA
Extraction protocol RNA was extracted from the cells using miRNeasy mini kit (Qiagen) according to manufacturer's protocol
Label Biotin
Label protocol Affymetrix Suggest Protocol
 
Hybridization protocol Affymetrix Suggest Protocol
Scan protocol Affymetrix Suggest Protocol
Description RNA was extracted from the cells using miRNeasy mini kit (Qiagen) according to manufacturer's protocol
Data processing RMA generated expression value using affy library in R using the custom CDF HuGene10stv1_Hs_ENTREZG_14.1.0 from brainarray.
 
Submission date Jun 14, 2016
Last update date May 15, 2019
Contact name Kahkeshan Hijazi
E-mail(s) [email protected]
Phone +16173099896
Organization name Boston University
Lab Computational Biomedicine
Street address 715 Albany Street
City Boston
State/province MA
ZIP/Postal code 02118
Country USA
 
Platform ID GPL15034
Series (1)
GSE83364 Tobacco-related alterations in airway gene expression are rapidly reversed within weeks following smoking cessation

Data table header descriptions
ID_REF
VALUE The data is RMA normalized using justRMA. The resultant table is on a log2 scale

Data table
ID_REF VALUE
1_at 6.702072835
10_at 3.369340534
100_at 5.306717193
1000_at 4.456568571
10000_at 4.128132462
100009676_at 5.756871757
10001_at 5.60505857
10002_at 5.023831582
10003_at 3.51814171
100033413_at 6.992083682
100033414_at 5.59646199
100033416_at 7.153976337
100033418_at 7.99798998
100033420_at 9.219248942
100033422_at 3.703905692
100033423_at 4.174706557
100033424_at 3.247057201
100033425_at 2.459428417
100033426_at 10.68267036
100033427_at 11.75645861

Total number of rows: 19741

Table truncated, full table size 401 Kbytes.




Supplementary file Size Download File type/resource
GSM2200288_AS_C1_15802.CEL.gz 3.5 Mb (ftp)(http) CEL
Processed data included within Sample table

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