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Sample GSM225365 Query DataSets for GSM225365
Status Public on Sep 01, 2007
Title D11 24h TLR2/1L
Sample type RNA
 
Source name Total RNA
Organism Homo sapiens
Characteristics Primary human peripherial monocytes
Extracted molecule total RNA
Extraction protocol Trizol total RNA extraction based on manufacturer's protocol.
RNA cleanup with RNeasy kit based on manufacturer's protocol.
Label Biotin
Label protocol UCLA Microarray Core Facility
 
Hybridization protocol UCLA Microarray Core Facility
Scan protocol UCLA Microarray Core Facility
Description Timecourse of TLR2/1 stimulated human monocytes with the Mycobacterium tuberculosis derived 19kDa lipopeptide.
Data processing UCLA Microarray Core Facility
 
Submission date Aug 28, 2007
Last update date Aug 14, 2011
Contact name Philip T. Liu
E-mail(s) [email protected]
Phone 310-825-6910
Fax 310-267-2121
Organization name University of California at Los Angeles
Department Department of Medicine, Divison of Dermatology
Lab Modlin
Street address 611 Charles E Young Dr. East, 522 MBI
City Los Angeles
State/province CA
ZIP/Postal code 90095
Country USA
 
Platform ID GPL96
Series (1)
GSE8921 Toll-like receptor triggering of a vitamin D-mediated human antimicrobial response

Data table header descriptions
ID_REF
VALUE Raw Detection Value
ABS_CALL Absent Call
DETECTION P-VALUE P value

Data table
ID_REF VALUE ABS_CALL DETECTION P-VALUE
AFFX-BioB-5_at 2707.66 P 0.0020226
AFFX-BioB-M_at 5971.89 P 9.4506e-05
AFFX-BioB-3_at 2740.65 P 0.00359458
AFFX-BioC-5_at 8343.18 P 0.000169227
AFFX-BioC-3_at 6620.91 P 7.00668e-05
AFFX-BioDn-5_at 9342.63 P 6.02111e-05
AFFX-BioDn-3_at 46391.1 P 8.14279e-05
AFFX-CreX-5_at 72940.8 P 4.42873e-05
AFFX-CreX-3_at 119920 P 4.42873e-05
AFFX-DapX-5_at 70.1443 A 0.52976
AFFX-DapX-M_at 360.146 A 0.327079
AFFX-DapX-3_at 54.7181 A 0.949771
AFFX-LysX-5_at 106.622 A 0.559354
AFFX-LysX-M_at 70.137 A 0.834139
AFFX-LysX-3_at 83.1866 A 0.574038
AFFX-PheX-5_at 16.1562 A 0.986189
AFFX-PheX-M_at 13.7621 A 0.989683
AFFX-PheX-3_at 619.397 A 0.39692
AFFX-ThrX-5_at 43.1437 A 0.868639
AFFX-ThrX-M_at 51.3639 A 0.783476

Total number of rows: 22283

Table truncated, full table size 665 Kbytes.




Supplementary file Size Download File type/resource
GSM225365.EXP.gz 466 b (ftp)(http) EXP
Processed data included within Sample table

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