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Sample GSM230288 Query DataSets for GSM230288
Status Public on Nov 01, 2007
Title CD49a+ rep3 (stromal cell study)
Sample type RNA
 
Source name normal prostate
Organism Homo sapiens
Characteristics CD49a+ MACS sorted cells
Extracted molecule total RNA
Extraction protocol Prostate tissue was MACS sorted for positive cells. Total RNA was extracted from the cell lysate using an RNeasy kit (Qiagen).
Label biotin
Label protocol Approximately 200 ng of total RNA was processed to produce biotinylated cRNA targets.
 
Hybridization protocol standard Affymetrix procedures
Scan protocol standard Affymetrix procedures
Description Prostate stromal fibromuscular cells
Data processing RMA of .cel files with Genespring 7.2
 
Submission date Sep 18, 2007
Last update date Aug 28, 2018
Contact name Jennifer A Hipp
E-mail(s) [email protected]
Organization name Wake Forest School of Medicine
Department Institute for Regenerative Medicine
Lab Atala
Street address Medical Center Blvd
City Winston-Salem
State/province NC
ZIP/Postal code 27157
Country USA
 
Platform ID GPL570
Series (2)
GSE9090 Reanalysis of GSE8884 Samples with Stromal Samples from GSE3998.
GSE9196 Comparison of ES, EB, and Blast cells to breast epithelial, leuckocytes, endothelial and stromal cells
Relations
Reanalysis of GSM91310
Reanalyzed by GSE64985
Reanalyzed by GSE119087

Data table header descriptions
ID_REF
VALUE RMA normalized

Data table
ID_REF VALUE
1007_s_at 7.661563841
1053_at 5.864852576
117_at 8.641566534
121_at 7.012860156
1255_g_at 3.088269133
1294_at 7.363792364
1316_at 5.540575744
1320_at 5.323176495
1405_i_at 4.108733986
1431_at 3.397114671
1438_at 5.034620955
1487_at 6.356226625
1494_f_at 4.949038707
1552256_a_at 6.628631846
1552257_a_at 6.752971901
1552258_at 4.304687131
1552261_at 4.718111809
1552263_at 4.675744039
1552264_a_at 4.751695353
1552266_at 4.877348568

Total number of rows: 54675

Table truncated, full table size 1198 Kbytes.




Supplementary file Size Download File type/resource
GSM230288_CD49a_03-04-04.CEL.gz 4.9 Mb (ftp)(http) CEL
Processed data included within Sample table

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