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Sample GSM230422 Query DataSets for GSM230422
Status Public on Nov 01, 2007
Title Young trained subject, biological replicate (YT7)
Sample type RNA
 
Source name Vastus Lateralis muscle,young trained subject
Organism Homo sapiens
Characteristics no additional information
Extracted molecule total RNA
Extraction protocol total RNAs were extracted using QIAGEN'S RNeasy Fibrous Tissue Kit
Label Biotin
Label protocol Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 5 ug total RNA (Expression Analysis Technical Manual, 2001, Affymetrix).
 
Hybridization protocol Following fragmentation, 10 ug of cRNA were hybridized for 16 hr at 45C. GeneChips were washed and stained in the Affymetrix Fluidics Station 400.
Scan protocol GeneChips were scanned using the The GeneChip® Scanner 3000 7G .
Description Expression of mRNA in Vastus Lateralis muscle,young trained subject
Data processing The data were analyzed with dChip using quantile normalization and PM-only Model Based Expression Indexing.
 
Submission date Sep 19, 2007
Last update date Aug 28, 2018
Contact name Yan W. Asmann
E-mail(s) [email protected]
Organization name Mayo Clinic
Street address 4500 San Pablo Road South
City Jacksonville
State/province FL
ZIP/Postal code 32224
Country USA
 
Platform ID GPL570
Series (1)
GSE9103 Skeletal Muscle Transcript Profiles in Trained or Sedentary Young and Old Subjects
Relations
Reanalyzed by GSE119087

Data table header descriptions
ID_REF
VALUE dChip PM-only model based expression indexing
ABS_CALL

Data table
ID_REF VALUE ABS_CALL
1007_s_at 82.551 P
1053_at 45.7 P
117_at 18.607 A
121_at 49.566 P
1255_g_at 9.474 A
1294_at 18.666 A
1316_at 18.461 A
1320_at 52.184 A
1405_i_at 68.896 A
1431_at 10.969 A
1438_at 17.265 A
1487_at 242.347 P
1494_f_at 95.779 A
1598_g_at 268.608 P
160020_at 224.269 A
1729_at 37.723 A
1773_at 34.725 P
177_at 12.351 P
179_at 400.166 A
1861_at 24.71 P

Total number of rows: 54613

Table truncated, full table size 1047 Kbytes.




Supplementary file Size Download File type/resource
GSM230422.cel.gz 3.8 Mb (ftp)(http) CEL
Processed data included within Sample table

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