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Status |
Public on Sep 27, 2007 |
Title |
Knockout saline, biological replicate 2 |
Sample type |
RNA |
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|
Source name |
Mouse Nucleus Accumbens from knockout saline treated mice
|
Organism |
Mus musculus |
Characteristics |
bilateral, 1mm-thick, 15gauge punches, pooled together from four mice
|
Extracted molecule |
total RNA |
Extraction protocol |
RNA was extracted with TriZol and purified with RNAeasy Micro kit.
|
Label |
biotin
|
Label protocol |
linear amplification kit Ambion #IL1791. Input amount: 200ng of total RNA, IVT 2hrs.
|
|
|
Hybridization protocol |
16hrs at 55degress C using Illumina reagents
|
Scan protocol |
Standard scan factor using Illumina Scanner
|
Description |
Nucleus Accumbends, Male 8-12 week old HDAC5 WT or KO mice treated with chronic (7 daily injections) saline or cocaine (20mg/kg).
|
Data processing |
The Raw data was extracted using MS5, and median-normalized.
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|
|
Submission date |
Sep 21, 2007 |
Last update date |
Aug 14, 2011 |
Contact name |
Will Renthal |
Organization name |
Brigham and Women's Hospital
|
Street address |
60 Fenwood Rd.
|
City |
Boston |
State/province |
MA |
ZIP/Postal code |
02115 |
Country |
USA |
|
|
Platform ID |
GPL4234 |
Series (1) |
GSE9134 |
Genome-wide gene expression in HDAC5 wildtype and knockout mice treated with chronic cocaine or saline |
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