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Sample GSM2579477 Query DataSets for GSM2579477
Status Public on Aug 28, 2017
Title tcf∆N-short embryo, biological rep1
Sample type RNA
 
Source name Naïve embryos expressing tcf∆N-short
Organism Drosophila melanogaster
Characteristics tissue: embryo
genotype: tcf∆N-short
Extracted molecule total RNA
Extraction protocol Extracted using Affymetrix recommended protocol
Label biotin
Label protocol Labelled using Affymetrix recommended protocol
 
Hybridization protocol Hybridised using Affymetrix recommended protocol
Scan protocol Scanned using Affymetrix recommended protocol
Description Naïve embryos expressing tcf∆N-short
Data processing The data were analyzed with R/Bioconductor and normalised using GC-RMA.
 
Submission date Apr 17, 2017
Last update date Aug 28, 2017
Contact name NATHAN HARMSTON
E-mail(s) [email protected]
Organization name Cardiff University
Street address Museum Avenue
City Cardiff
ZIP/Postal code CF10 3AX
Country United Kingdom
 
Platform ID GPL1322
Series (1)
GSE97873 An embryonic system to assess Wnt transcriptional targets: Comparing opposing Wnt pathways and transcriptional activation and repression.

Data table header descriptions
ID_REF
VALUE GC-RMA signal intensity

Data table
ID_REF VALUE
1616608_a_at 10.07927016
1622892_s_at 6.588561491
1622893_at 11.49498656
1622894_at 2.502827497
1622895_at 7.404869876
1622896_at 3.726802882
1622897_at 4.721952394
1622898_a_at 8.281078112
1622899_at 2.387759913
1622900_at 2.289150085
1622901_at 2.35780462
1622902_at 6.197794618
1622903_s_at 6.729539553
1622904_at 2.289150085
1622905_at 2.289150085
1622906_at 5.321048884
1622907_at 5.567965846
1622908_a_at 4.005622858
1622909_at 7.332673009
1622910_at 2.289150085

Total number of rows: 18952

Table truncated, full table size 432 Kbytes.




Supplementary file Size Download File type/resource
GSM2579477_XL_TCF_DN_1_Drosophila_2.CEL.gz 1.6 Mb (ftp)(http) CEL
Processed data included within Sample table

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