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Sample GSM266125 Query DataSets for GSM266125
Status Public on Sep 30, 2008
Title Regulation of the RPE (retinal pigment epithelium) transcriptome by the neural retina (E14SF3-SER-3)
Sample type RNA
 
Source name retinal pigment epithelium
Organism Gallus gallus
Characteristics E14 RPE in basal medium supplemented with 2% fetal bovine serum
Extracted molecule total RNA
Extraction protocol RNeasy Protect^ kit (Qiagen)
Label biotin-U
Label protocol affymetrix 3'-amplification ivt
 
Hybridization protocol standard
Scan protocol standard
Description N/A
Data processing signal value generated from global scaling
 
Submission date Feb 15, 2008
Last update date Sep 30, 2008
Contact name Lawrence J Rizzolo
E-mail(s) [email protected]
Organization name Yale University
Department Dept of Surgery
Street address 333 Cedar St
City New Haven
State/province CT
ZIP/Postal code 06511
Country USA
 
Platform ID GPL3213
Series (1)
GSE10538 Regulation of the early embryonic RPE (retinal pigment epithelium) transcriptome by the neural retina

Data table header descriptions
ID_REF
VALUE MAS5 value
ABS_CALL absent/present
DETECTION P-VALUE p-value

Data table
ID_REF VALUE ABS_CALL DETECTION P-VALUE
AFFX-BioB-5_at 347.65 P 0.000662269
AFFX-BioB-M_at 532.182 P 4.42873e-05
AFFX-BioB-3_at 330.294 P 9.4506e-05
AFFX-BioC-5_at 1297.9 P 5.16732e-05
AFFX-BioC-3_at 1381.92 P 4.42873e-05
AFFX-BioDn-5_at 2808.82 P 4.42873e-05
AFFX-BioDn-3_at 6276.25 P 9.4506e-05
AFFX-CreX-5_at 16947.5 P 5.16732e-05
AFFX-CreX-3_at 20456.7 P 4.42873e-05
AFFX-DapX-5_at 32.7486 A 0.313723
AFFX-DapX-M_at 40.6404 A 0.262827
AFFX-DapX-3_at 25.4862 A 0.313723
AFFX-LysX-5_at 29.5502 A 0.382599
AFFX-LysX-M_at 15.1651 A 0.834139
AFFX-LysX-3_at 6.09059 A 0.470241
AFFX-PheX-5_at 4.1435 A 0.876428
AFFX-PheX-M_at 3.78995 A 0.937087
AFFX-PheX-3_at 15.5627 A 0.686277
AFFX-ThrX-5_at 11.2115 A 0.617401
AFFX-ThrX-M_at 45.8216 A 0.185131

Total number of rows: 38535

Table truncated, full table size 1491 Kbytes.




Supplementary file Size Download File type/resource
GSM266125.CEL.gz 3.5 Mb (ftp)(http) CEL
GSM266125.CHP.gz 207.3 Kb (ftp)(http) CHP
Processed data included within Sample table

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