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Sample GSM266315 Query DataSets for GSM266315
Status Public on Sep 30, 2008
Title Regulation of the RPE (retinal pigment epithelium) transcriptome by the neural retina (E14RCSF3-2)
Sample type RNA
 
Source name retinal pigment epithelium
Organism Gallus gallus
Characteristics E14 RPE in basal medium supplemented with retinal conditioned medium
Extracted molecule total RNA
Extraction protocol RNeasy Protect^ kit (Qiagen)
Label biotin-U
Label protocol affymetrix 3'-amplification ivt
 
Hybridization protocol standard
Scan protocol standard
Description N/A
Data processing signal value generated from global scaling
 
Submission date Feb 15, 2008
Last update date Sep 30, 2008
Contact name Lawrence J Rizzolo
E-mail(s) [email protected]
Organization name Yale University
Department Dept of Surgery
Street address 333 Cedar St
City New Haven
State/province CT
ZIP/Postal code 06511
Country USA
 
Platform ID GPL3213
Series (1)
GSE10538 Regulation of the early embryonic RPE (retinal pigment epithelium) transcriptome by the neural retina

Data table header descriptions
ID_REF
VALUE MAS5 value
ABS_CALL absent/present
DETECTION P-VALUE p-value

Data table
ID_REF VALUE ABS_CALL DETECTION P-VALUE
AFFX-BioB-5_at 376.453 P 0.000581214
AFFX-BioB-M_at 607.553 P 4.42873e-05
AFFX-BioB-3_at 419.594 P 6.02111e-05
AFFX-BioC-5_at 1313.63 P 5.16732e-05
AFFX-BioC-3_at 1364.66 P 4.42873e-05
AFFX-BioDn-5_at 2805.78 P 4.42873e-05
AFFX-BioDn-3_at 6155.38 P 7.00668e-05
AFFX-CreX-5_at 16121.6 P 5.16732e-05
AFFX-CreX-3_at 20311.3 P 4.42873e-05
AFFX-DapX-5_at 7.7966 A 0.686277
AFFX-DapX-M_at 19.9409 A 0.52976
AFFX-DapX-3_at 2.44272 A 0.981719
AFFX-LysX-5_at 23.4569 A 0.5
AFFX-LysX-M_at 35.7631 A 0.760937
AFFX-LysX-3_at 7.56456 A 0.712257
AFFX-PheX-5_at 4.20694 A 0.953518
AFFX-PheX-M_at 4.14154 A 0.937071
AFFX-PheX-3_at 15.4723 A 0.645547
AFFX-ThrX-5_at 5.05218 A 0.876428
AFFX-ThrX-M_at 33.3577 A 0.195266

Total number of rows: 38535

Table truncated, full table size 1492 Kbytes.




Supplementary file Size Download File type/resource
GSM266315.CEL.gz 3.5 Mb (ftp)(http) CEL
GSM266315.CHP.gz 207.5 Kb (ftp)(http) CHP
Processed data included within Sample table

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