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Sample GSM2806601 Query DataSets for GSM2806601
Status Public on Oct 01, 2019
Title T,biological rep2
Sample type RNA
 
Source name bladder cancer T24 cells treated with piperlongumine
Organism Homo sapiens
Characteristics cell line: T24
cell type: bladder cancer cell line
treated with: Piperlongumine (PL)
Treatment protocol T24 cells was subsequently treated with PL 20 μM or 0 μM (DMSO control)
Growth protocol T24 cells in logarithmic growth phase were seeded in 60 mm dishes at a density of 4 × 104 cell/cm2 and incubated overnight.
Extracted molecule total RNA
Extraction protocol After drug treatment, total RNA was extracted from bladder cancer cell using Trizol reagent (Invitrogen, Carlsbad, CA, USA) according to the manufacturer’s protocol.
Label biotin
Label protocol 1000 ng of total RNA was labeled using Affymetrix Flashtag Biotin HSR RNA Labeling kit (P/N 901910, Affymetrix, Santa Clara, CA, USA) according to the manufacturer's instructions.
 
Hybridization protocol 900 ng of biotin labeled RNA was hybridized to Affymetrix GeneChip® miRNA 4.0 Arrays at 48 °C and 60 rpm for 16-18 h.
Scan protocol GeneChips were scanned using the Affymetrix GeneChip Scanner 3000 7G.
Description A1089
miRNA expression data from piperlongumine treated bladder cancer T24 cells
Data processing Data were collected using Affymetrix Command Console Software.
 
Submission date Oct 08, 2017
Last update date Oct 01, 2019
Contact name Di Liu
E-mail(s) [email protected]
Phone 13507171375
Organization name Union Hospital
Department Department of Urology
Street address 1277 Jiefang Road
City Wuhan
State/province Hubei
ZIP/Postal code 430022
Country China
 
Platform ID GPL21572
Series (1)
GSE104717 Expression data from piperlongumine treated bladder cancer T24 cells

Data table header descriptions
ID_REF
VALUE signal intensity

Data table
ID_REF VALUE
20509994 1.28082
20509489 0.852333
20526577 8.46772
20533477 1.19321
20522264 0.35598
20520226 0.877246
20502100 0.57369
20500108 0.799776
20515254 1.36637
20504680 9.78889
20504235 0.725221
20524608 0.930454
20504079 12.9745
20507996 1.15794
20537757 1.20553
20523683 0.923964
20510498 1.15279
20533832 0.93032
20518421 0.917073
20520200 1.03706

Total number of rows: 36249

Table truncated, full table size 613 Kbytes.




Supplementary file Size Download File type/resource
GSM2806601_A1089_miRNA-4_0_.CEL.gz 779.7 Kb (ftp)(http) CEL
Processed data included within Sample table

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