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Sample GSM296743 Query DataSets for GSM296743
Status Public on Nov 18, 2008
Title Control_EXP-30_U133B
Sample type RNA
 
Source name Proximal muscle (Quadriceps)
Organism Homo sapiens
Characteristics Gender: Male, Age: 84 years
Mutations: No
Extracted molecule total RNA
Extraction protocol RNAPlus (Qbiogene) extraction of total RNA was performed according to the standard protocols for muscle tissue.
Label Biotin
Label protocol Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 5 ug total RNA (Affymetrix Protocol, May 5, 2005).
 
Hybridization protocol Following fragmentation, 15 ug of cRNA were hybridized for 16 hr at 45C on HG-U133A/B Array. GeneChips were washed and stained in the Affymetrix Fluidics Station 400.
Scan protocol GeneChips were scanned using the Agilent GeneArray Scanner G2500A.
Description Control_EXP-30_U133B
Data processing Arrays were scanned and raw data were normalized using RMA (Robust Multichip Average)
 
Submission date Jun 04, 2008
Last update date Nov 11, 2008
Contact name Amets Saenz
E-mail(s) [email protected]
Phone +34 943 00 70 61
Fax +34 943 00 70 61
Organization name Donostia Hospital
Lab Unidad Experimental
Street address PÂș dr Begiristain s/n
City San Sebastian
State/province Gipuzkoa
ZIP/Postal code 20.014
Country Spain
 
Platform ID GPL97
Series (1)
GSE11681 Expression profiling in LGMD2A muscles

Data table header descriptions
ID_REF
VALUE RMA signal intensity

Data table
ID_REF VALUE
200000_s_at 7.668217379
200001_at 8.360001897
200002_at 11.16330898
200003_s_at 10.6423912
200004_at 9.309276963
200005_at 7.792103673
200006_at 10.57214676
200007_at 9.783825182
200008_s_at 7.915532913
200009_at 8.978349221
200010_at 11.15693217
200011_s_at 5.231090926
200012_x_at 12.15928258
200013_at 11.3791415
200014_s_at 7.739186057
200015_s_at 7.3337904
200016_x_at 10.52670103
200017_at 11.27151693
200018_at 12.18877955
200019_s_at 11.0680572

Total number of rows: 22645

Table truncated, full table size 492 Kbytes.




Supplementary file Size Download File type/resource
GSM296743.CEL.gz 1.9 Mb (ftp)(http) CEL
Processed data included within Sample table

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