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Sample GSM3024797 Query DataSets for GSM3024797
Status Public on Jul 25, 2019
Title G9Q5B
Sample type RNA
 
Source name leukocyte transcriptome
Organism Homo sapiens
Characteristics cell type: leukocyte
gender: M
age (months): 23.786
diagnosis: TD
ados_coso: 0
Extracted molecule total RNA
Extraction protocol four to six milliliters of blood were collected into ethylenediaminetetraacetic-coated tubes from all subjects. Total RNA was extracted following standard procedures and manufacturer’s instructions (Ambion)
Label biotin
Label protocol Standard Illumina labeling protocol
 
Hybridization protocol Standard Illumina hyb protocol
Scan protocol Standard Illumina scanning protocol
Description replicate1
Data processing Outlier samples are removed. Expression data are log2 transformed and quantile normalized for probes with detection p-value <0.05 (standard settings).
 
Submission date Feb 27, 2018
Last update date Jul 25, 2019
Contact name Vahid H Gazestani
E-mail(s) [email protected]
Organization name UCSD
Street address 8110 La Jolla Shores Drive, Suite 201
City La Jolla
State/province California
ZIP/Postal code 92093
Country USA
 
Platform ID GPL10558
Series (2)
GSE111175 Perturbations of PI3K/AKT, RAS/ERK, WNT/B-catenin networks in leukocytes are linked to ASD genetics and fetal origins of autism
GSE111176 Transcriptional organization of autism spectrum disorder

Data table header descriptions
ID_REF
VALUE quantile normalized

Data table
ID_REF VALUE
ILMN_1762337 5.776712479
ILMN_2055271 6.025487287
ILMN_1736007 5.815442282
ILMN_2383229 6.111416936
ILMN_1806310 5.688718292
ILMN_1779670 5.838923835
ILMN_1653355 5.92271742
ILMN_1717783 5.68632974
ILMN_1705025 6.104409997
ILMN_1814316 5.878374473
ILMN_2359168 5.865789603
ILMN_1731507 5.819757482
ILMN_1787689 5.724561108
ILMN_3241953 6.461493526
ILMN_1745607 5.652926331
ILMN_2136495 5.777594617
ILMN_1668111 5.794105448
ILMN_2295559 6.072032302
ILMN_1735045 5.701296591
ILMN_1680754 6.308384837

Total number of rows: 47323

Table truncated, full table size 1150 Kbytes.




Supplementary data files not provided
Processed data included within Sample table

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