|
Status |
Public on Jul 25, 2019 |
Title |
G9Q5B |
Sample type |
RNA |
|
|
Source name |
leukocyte transcriptome
|
Organism |
Homo sapiens |
Characteristics |
cell type: leukocyte gender: M age (months): 23.786 diagnosis: TD ados_coso: 0
|
Extracted molecule |
total RNA |
Extraction protocol |
four to six milliliters of blood were collected into ethylenediaminetetraacetic-coated tubes from all subjects. Total RNA was extracted following standard procedures and manufacturer’s instructions (Ambion)
|
Label |
biotin
|
Label protocol |
Standard Illumina labeling protocol
|
|
|
Hybridization protocol |
Standard Illumina hyb protocol
|
Scan protocol |
Standard Illumina scanning protocol
|
Description |
replicate1
|
Data processing |
Outlier samples are removed. Expression data are log2 transformed and quantile normalized for probes with detection p-value <0.05 (standard settings).
|
|
|
Submission date |
Feb 27, 2018 |
Last update date |
Jul 25, 2019 |
Contact name |
Vahid H Gazestani |
E-mail(s) |
[email protected]
|
Organization name |
UCSD
|
Street address |
8110 La Jolla Shores Drive, Suite 201
|
City |
La Jolla |
State/province |
California |
ZIP/Postal code |
92093 |
Country |
USA |
|
|
Platform ID |
GPL10558 |
Series (2) |
GSE111175 |
Perturbations of PI3K/AKT, RAS/ERK, WNT/B-catenin networks in leukocytes are linked to ASD genetics and fetal origins of autism |
GSE111176 |
Transcriptional organization of autism spectrum disorder |
|