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Sample GSM3024801 Query DataSets for GSM3024801
Status Public on Jul 25, 2019
Title S2N9L
Sample type RNA
 
Source name leukocyte transcriptome
Organism Homo sapiens
Characteristics cell type: leukocyte
gender: M
age (months): 22.111
diagnosis: LD
ados_coso: 3
Extracted molecule total RNA
Extraction protocol four to six milliliters of blood were collected into ethylenediaminetetraacetic-coated tubes from all subjects. Total RNA was extracted following standard procedures and manufacturer’s instructions (Ambion)
Label biotin
Label protocol Standard Illumina labeling protocol
 
Hybridization protocol Standard Illumina hyb protocol
Scan protocol Standard Illumina scanning protocol
Description replicate1
Data processing Outlier samples are removed. Expression data are log2 transformed and quantile normalized for probes with detection p-value <0.05 (standard settings).
 
Submission date Feb 27, 2018
Last update date Jul 25, 2019
Contact name Vahid H Gazestani
E-mail(s) [email protected]
Organization name UCSD
Street address 8110 La Jolla Shores Drive, Suite 201
City La Jolla
State/province California
ZIP/Postal code 92093
Country USA
 
Platform ID GPL10558
Series (2)
GSE111175 Perturbations of PI3K/AKT, RAS/ERK, WNT/B-catenin networks in leukocytes are linked to ASD genetics and fetal origins of autism
GSE111176 Transcriptional organization of autism spectrum disorder

Data table header descriptions
ID_REF
VALUE quantile normalized

Data table
ID_REF VALUE
ILMN_1762337 6.040133284
ILMN_2055271 5.886042311
ILMN_1736007 6.217445177
ILMN_2383229 5.973944397
ILMN_1806310 6.249056553
ILMN_1779670 5.81731923
ILMN_1653355 5.877798924
ILMN_1717783 5.814495651
ILMN_1705025 6.090205766
ILMN_1814316 6.316456514
ILMN_2359168 5.681299954
ILMN_1731507 5.843433464
ILMN_1787689 5.921289351
ILMN_3241953 6.697582353
ILMN_1745607 5.615160894
ILMN_2136495 5.726527682
ILMN_1668111 6.080359915
ILMN_2295559 5.666662537
ILMN_1735045 5.601740634
ILMN_1680754 6.366895889

Total number of rows: 47323

Table truncated, full table size 1150 Kbytes.




Supplementary data files not provided
Processed data included within Sample table

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