|
Status |
Public on Apr 23, 2010 |
Title |
UIP, biological rep9 |
Sample type |
RNA |
|
|
Source name |
Lung tissue with usual interstitial pneumonia (UIP), biological rep9
|
Organism |
Homo sapiens |
Characteristics |
Tissue from a patient with pathological diagnosis of usual interstitial pneumonia.
|
Extracted molecule |
total RNA |
Extraction protocol |
Total RNA extracted using miRNeasy mini kit according to the manufacturer's instructions.
|
Label |
Cy3
|
Label protocol |
Cy3 labeled RNA was prepared according to the standard Agilent protocol from 100ng total RNA
|
|
|
Hybridization protocol |
Labeled RNA was hybridized for 20 hr at 55C on Agilent 8X15K microRNA array. Arrays were washed according to the manufacturer's protocol.
|
Scan protocol |
Scanned on an Agilent G2505A Scanner
|
Description |
Lung tissue samples obtained from the University of Pittsburgh Health Sciences Tissue Bank. miRNA expression data from a lung with usual interstitial pneumonia.
|
Data processing |
Agilent Feature Extraction v9.5.3, default miRNA parameters
|
|
|
Submission date |
Oct 23, 2008 |
Last update date |
Apr 23, 2010 |
Contact name |
Kusum Vijay Pandit |
E-mail(s) |
[email protected]
|
Phone |
412-624-9046
|
Organization name |
University of Pittsburgh
|
Department |
Medicine-PACCM
|
Street address |
200, Lothrop street, W1200-25A Biomedical Science Tower
|
City |
Pittsburgh |
State/province |
PA |
ZIP/Postal code |
15213 |
Country |
USA |
|
|
Platform ID |
GPL6955 |
Series (1) |
GSE13316 |
miRNA expression data in idiopathic pulmonary fibrosis |
|