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Sample GSM3801059 Query DataSets for GSM3801059
Status Public on May 23, 2019
Title siCD248 Normoxia [189]
Sample type RNA
 
Source name Treated with siRNA targeting CD248 and maintained in 21% oxygen
Organism Homo sapiens
Characteristics cell type: hASC differentiated to adipocytes
sirna: siCD248
condition: 21% oxygen
Treatment protocol 40 nM siRNA delivered with HiperFect. Oxygen levels were reduced in an hypoxic chamber.
Growth protocol 13 days with adipogenic differentiation cocktail in the media.
Extracted molecule total RNA
Extraction protocol RNA extracted using a column based RNA extraction kit (from Machery-Nagel).
Label biotin
Label protocol Not provided
 
Hybridization protocol Not provided
Scan protocol Not provided
Description 189
Data processing SST-RMA (TAC)
 
Submission date May 22, 2019
Last update date May 23, 2019
Contact name Paul Petrus
E-mail(s) [email protected]
Organization name Karolinska intitute
Lab Lipidlab
Street address Hälsovägen 7
City Stockholm
ZIP/Postal code 14157
Country Sweden
 
Platform ID GPL23159
Series (1)
GSE131667 CD248 knockdown in in vitro differentiated adipocytes exposed to hypoxia

Data table header descriptions
ID_REF
VALUE Log2 SST-RMA value

Data table
ID_REF VALUE
TC1100012126.hg.1 6.79
TC0X00008794.hg.1 7.47
TC0700009036.hg.1 4.96
TC2100006784.hg.1 6.48
TC1100011282.hg.1 6.78
TC1900009443.hg.1 9.13
TC0100010584.hg.1 4.39
TC1000009536.hg.1 11.87
TC0700008582.hg.1 9.18
TC0800008124.hg.1 4.61
TC0100010921.hg.1 9.53
TC1400010730.hg.1 4.1
TC0400009223.hg.1 13.1
TC0300006677.hg.1 10.42
TC0100014040.hg.1 7.01
TC1400009186.hg.1 13.84
TC1000008881.hg.1 9.84
TC0X00009611.hg.1 9.29
TC0100013561.hg.1 8.25
TC1600011221.hg.1 8.14

Total number of rows: 21448

Table truncated, full table size 484 Kbytes.




Supplementary file Size Download File type/resource
GSM3801059_PP06_189_Clariom_S_Human.CEL.gz 1.0 Mb (ftp)(http) CEL
Processed data included within Sample table

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