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| Status |
Public on Mar 20, 2009 |
| Title |
mSAGE_Brain_normal_P84-P90_LCM_SM181 |
| Sample type |
SAGE |
| Anchor |
NlaIII
|
| Tag Count |
105719 |
| Tag Length |
10 |
| |
|
| Source name |
brain, normal, rahpe nuclei, laser capture microdissected, extracted short sage, sagelite, 84 days post natal
|
| Organism |
Mus musculus |
| Characteristics |
organ/tissue: brain
tissue preparation: laser capture microdissected
age: P84
sex: unknown
|
| Biomaterial provider |
Elizabeth Simpson Lab
|
| Extracted molecule |
total RNA |
| Extraction protocol |
N/A
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| |
|
| Description |
Tagging_enzyme: Mme I
CGAP_Numeric_library_ID: 1762
Library_producer: David Charest Lab
Laboratory: Marco Marra, Genome Sciences Centre, Vancouver, BC
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| |
|
| Submission date |
Mar 19, 2009 |
| Last update date |
Mar 20, 2009 |
| Contact name |
Cancer Genome Anatomy Project CGAP |
| E-mail(s) |
[email protected]
|
| Phone |
301-496-1550
|
| URL |
http://cgap.nci.nih.gov/
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| Organization name |
National Cancer Institute
|
| Department |
Cancer Genome Anatomy Project
|
| Street address |
|
| City |
Bethesda |
| State/province |
MD |
| ZIP/Postal code |
20852 |
| Country |
USA |
| |
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| Platform ID |
GPL11 |
| Series (2) |
| GSE14 |
Cancer Genome Anatomy Project (CGAP) SAGE Libraries |
| GSE15311 |
Cancer Genome Anatomy Project (CGAP) Mouse SAGE |
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| Data table header descriptions |
| TAG |
|
| COUNT |
|
| TPM |
tags per million |
| Data table |
| TAG |
COUNT |
TPM |
| AAAAAAAAAA |
365 |
3452.55 |
| AAAAAAAAAC |
3 |
28.38 |
| AAAAAAAAAG |
4 |
37.84 |
| AAAAAAAAAT |
3 |
28.38 |
| AAAAAAAAGA |
2 |
18.92 |
| AAAAAAAATA |
2 |
18.92 |
| AAAAAAACAA |
1 |
9.46 |
| AAAAAAAGAA |
6 |
56.75 |
| AAAAAAAGCA |
1 |
9.46 |
| AAAAAAATAA |
13 |
122.97 |
| AAAAAAATAG |
1 |
9.46 |
| AAAAAAATGT |
1 |
9.46 |
| AAAAAACAAA |
1 |
9.46 |
| AAAAAACCAA |
2 |
18.92 |
| AAAAAACCAG |
1 |
9.46 |
| AAAAAACTGT |
1 |
9.46 |
| AAAAAAGATA |
1 |
9.46 |
| AAAAAAGCAA |
1 |
9.46 |
| AAAAAATAAA |
3 |
28.38 |
| AAAAAATAAT |
3 |
28.38 |
Total number of rows: 25540
Table truncated, full table size 460 Kbytes.
| Supplementary data files not provided |
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