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Sample GSM39260 Query DataSets for GSM39260
Status Public on Jan 28, 2005
Title vector d4, rep 3
Sample type RNA
 
Source name transduced NIH-3T3 cellline
Organism Mus musculus
Extracted molecule total RNA
 
Description NIH-3T3 cells transduced with either EBF1-, PPARg2- or empty vector were stimulated with hormones to initiate adipocyte differentiation. RNA extraction was done using TriZol at d0, d2, d4 and d10 after stimulation. Samples were handled according to standard affymetrix protocols. 7 independent stimulation experiments were analysed.
Keywords = Adipogenesis, early B-cell factor 1 (EBF1), commitment, differentiation, NIH-3T3, pparg
 
Submission date Jan 21, 2005
Last update date May 27, 2005
Contact name Robert MÃ¥nsson
E-mail(s) [email protected]
Phone +46462223829
Organization name Lund Stem Cell Center
Department Hematopoietic stem cell biology
Street address Klinikgatan 26, BMC B12
City Lund
ZIP/Postal code 221 84
Country Sweden
 
Platform ID GPL81
Series (1)
GSE2192 Differentiation of NIH-3T3 cells to adipocytes by PPARg or EBF1 over-expression.

Data table header descriptions
ID_REF
VALUE 'signal' a measure of the abundance of a transcript using dChip
ABS_CALL the call in an absolute analysis that indicates if the transcript was present (P), absent (A), marginal (M), or no call (NC)
SE standard error

Data table
ID_REF VALUE ABS_CALL SE
AFFX-MurIL2_at 83.6357 A 4.32169
AFFX-MurIL10_at 56.472 A 2.36226
AFFX-MurIL4_at 37.692 A 2.37657
AFFX-MurFAS_at 67.954 P 3.46459
AFFX-BioB-5_at 646.637 P 17.0819
AFFX-BioB-M_at 952.632 P 26.0107
AFFX-BioB-3_at 979.911 P 18.5641
AFFX-BioC-5_at 1462.34 P 43.7934
AFFX-BioC-3_at 1270.37 P 31.9441
AFFX-BioDn-5_at 1397.9 P 32.5671
AFFX-BioDn-3_at 4307.16 P 100.886
AFFX-CreX-5_at 6429.08 P 188.509
AFFX-CreX-3_at 8932.26 P 159.641
AFFX-BioB-5_st 138.52 A 3.30067
AFFX-BioB-M_st 168.358 P 6.71651
AFFX-BioB-3_st 167.128 A 8.51326
AFFX-BioC-5_st 232.632 A 8.65547
AFFX-BioC-3_st 78.3062 P 5.0149
AFFX-BioDn-5_st 79.068 A 3.69319
AFFX-BioDn-3_st 302.497 A 7.35577

Total number of rows: 12488

Table truncated, full table size 338 Kbytes.




Supplementary file Size Download File type/resource
GSM39260.CEL.gz 2.6 Mb (ftp)(http) CEL
GSM39260.EXP.gz 528 b (ftp)(http) EXP

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