GEO help: Mouse over screen elements for information.
Status
Public on Jan 28, 2005
Title
vector d4, rep 3
Sample type
RNA
Source name
transduced NIH-3T3 cellline
Organism
Mus musculus
Extracted molecule
total RNA
Description
NIH-3T3 cells transduced with either EBF1-, PPARg2- or empty vector were stimulated with hormones to initiate adipocyte differentiation. RNA extraction was done using TriZol at d0, d2, d4 and d10 after stimulation. Samples were handled according to standard affymetrix protocols. 7 independent stimulation experiments were analysed. Keywords = Adipogenesis, early B-cell factor 1 (EBF1), commitment, differentiation, NIH-3T3, pparg
Submission date
Jan 21, 2005
Last update date
May 27, 2005
Contact name
Robert MÃ¥nsson
E-mail(s)
[email protected]
Phone
+46462223829
Organization name
Lund Stem Cell Center
Department
Hematopoietic stem cell biology
Street address
Klinikgatan 26, BMC B12
City
Lund
ZIP/Postal code
221 84
Country
Sweden
Platform ID
GPL81
Series (1)
GSE2192
Differentiation of NIH-3T3 cells to adipocytes by PPARg or EBF1 over-expression.
Data table header descriptions
ID_REF
VALUE
'signal' a measure of the abundance of a transcript using dChip
ABS_CALL
the call in an absolute analysis that indicates if the transcript was present (P), absent (A), marginal (M), or no call (NC)
SE
standard error
Data table
ID_REF
VALUE
ABS_CALL
SE
AFFX-MurIL2_at
83.6357
A
4.32169
AFFX-MurIL10_at
56.472
A
2.36226
AFFX-MurIL4_at
37.692
A
2.37657
AFFX-MurFAS_at
67.954
P
3.46459
AFFX-BioB-5_at
646.637
P
17.0819
AFFX-BioB-M_at
952.632
P
26.0107
AFFX-BioB-3_at
979.911
P
18.5641
AFFX-BioC-5_at
1462.34
P
43.7934
AFFX-BioC-3_at
1270.37
P
31.9441
AFFX-BioDn-5_at
1397.9
P
32.5671
AFFX-BioDn-3_at
4307.16
P
100.886
AFFX-CreX-5_at
6429.08
P
188.509
AFFX-CreX-3_at
8932.26
P
159.641
AFFX-BioB-5_st
138.52
A
3.30067
AFFX-BioB-M_st
168.358
P
6.71651
AFFX-BioB-3_st
167.128
A
8.51326
AFFX-BioC-5_st
232.632
A
8.65547
AFFX-BioC-3_st
78.3062
P
5.0149
AFFX-BioDn-5_st
79.068
A
3.69319
AFFX-BioDn-3_st
302.497
A
7.35577
Total number of rows: 12488 Table truncated, full table size 338 Kbytes .Supplementary file
Size
Download
File type/resource
GSM39260.CEL.gz
2.6 Mb
(ftp) (http)
CEL
GSM39260.EXP.gz
528 b
(ftp) (http)
EXP