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Sample GSM39286 Query DataSets for GSM39286
Status Public on Jan 28, 2005
Title EBF1 d10, rep 2
Sample type RNA
 
Source name transduced NIH-3T3 cellline
Organism Mus musculus
Extracted molecule total RNA
 
Description NIH-3T3 cells transduced with either EBF1-, PPARg2- or empty vector were stimulated with hormones to initiate adipocyte differentiation. RNA extraction was done using TriZol at d0, d2, d4 and d10 after stimulation. Samples were handled according to standard affymetrix protocols. 7 independent stimulation experiments were analysed.
Keywords = Adipogenesis, early B-cell factor 1 (EBF1), commitment, differentiation, NIH-3T3, pparg
 
Submission date Jan 21, 2005
Last update date May 27, 2005
Contact name Robert MÃ¥nsson
E-mail(s) [email protected]
Phone +46462223829
Organization name Lund Stem Cell Center
Department Hematopoietic stem cell biology
Street address Klinikgatan 26, BMC B12
City Lund
ZIP/Postal code 221 84
Country Sweden
 
Platform ID GPL81
Series (1)
GSE2192 Differentiation of NIH-3T3 cells to adipocytes by PPARg or EBF1 over-expression.

Data table header descriptions
ID_REF
VALUE 'signal' a measure of the abundance of a transcript using dChip
ABS_CALL the call in an absolute analysis that indicates if the transcript was present (P), absent (A), marginal (M), or no call (NC)
SE standard error

Data table
ID_REF VALUE ABS_CALL SE
AFFX-MurIL2_at 98.974 A 2.33381
AFFX-MurIL10_at 64.4117 A 2.28814
AFFX-MurIL4_at 38.1426 A 1.46081
AFFX-MurFAS_at 138.768 P 6.57694
AFFX-BioB-5_at 445.234 P 15.7914
AFFX-BioB-M_at 610.436 P 27.5711
AFFX-BioB-3_at 618.271 P 20.9774
AFFX-BioC-5_at 1027.29 P 35.342
AFFX-BioC-3_at 1012.11 P 29.7809
AFFX-BioDn-5_at 1423.87 P 41.7489
AFFX-BioDn-3_at 4231 P 108.165
AFFX-CreX-5_at 9112.95 P 229.393
AFFX-CreX-3_at 12010.7 P 271.183
AFFX-BioB-5_st 135.599 A 3.9023
AFFX-BioB-M_st 228.763 A 3.15398
AFFX-BioB-3_st 198.691 A 12.4609
AFFX-BioC-5_st 224.162 A 7.78226
AFFX-BioC-3_st 104.991 A 3.80981
AFFX-BioDn-5_st 94.4259 A 5.62148
AFFX-BioDn-3_st 241.049 P 20.3603

Total number of rows: 12488

Table truncated, full table size 339 Kbytes.




Supplementary file Size Download File type/resource
GSM39286.CEL.gz 2.7 Mb (ftp)(http) CEL
GSM39286.EXP.gz 525 b (ftp)(http) EXP

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