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Status
Public on Jan 28, 2005
Title
EBF1 d10, rep 2
Sample type
RNA
Source name
transduced NIH-3T3 cellline
Organism
Mus musculus
Extracted molecule
total RNA
Description
NIH-3T3 cells transduced with either EBF1-, PPARg2- or empty vector were stimulated with hormones to initiate adipocyte differentiation. RNA extraction was done using TriZol at d0, d2, d4 and d10 after stimulation. Samples were handled according to standard affymetrix protocols. 7 independent stimulation experiments were analysed. Keywords = Adipogenesis, early B-cell factor 1 (EBF1), commitment, differentiation, NIH-3T3, pparg
Submission date
Jan 21, 2005
Last update date
May 27, 2005
Contact name
Robert MÃ¥nsson
E-mail(s)
[email protected]
Phone
+46462223829
Organization name
Lund Stem Cell Center
Department
Hematopoietic stem cell biology
Street address
Klinikgatan 26, BMC B12
City
Lund
ZIP/Postal code
221 84
Country
Sweden
Platform ID
GPL81
Series (1)
GSE2192
Differentiation of NIH-3T3 cells to adipocytes by PPARg or EBF1 over-expression.
Data table header descriptions
ID_REF
VALUE
'signal' a measure of the abundance of a transcript using dChip
ABS_CALL
the call in an absolute analysis that indicates if the transcript was present (P), absent (A), marginal (M), or no call (NC)
SE
standard error
Data table
ID_REF
VALUE
ABS_CALL
SE
AFFX-MurIL2_at
98.974
A
2.33381
AFFX-MurIL10_at
64.4117
A
2.28814
AFFX-MurIL4_at
38.1426
A
1.46081
AFFX-MurFAS_at
138.768
P
6.57694
AFFX-BioB-5_at
445.234
P
15.7914
AFFX-BioB-M_at
610.436
P
27.5711
AFFX-BioB-3_at
618.271
P
20.9774
AFFX-BioC-5_at
1027.29
P
35.342
AFFX-BioC-3_at
1012.11
P
29.7809
AFFX-BioDn-5_at
1423.87
P
41.7489
AFFX-BioDn-3_at
4231
P
108.165
AFFX-CreX-5_at
9112.95
P
229.393
AFFX-CreX-3_at
12010.7
P
271.183
AFFX-BioB-5_st
135.599
A
3.9023
AFFX-BioB-M_st
228.763
A
3.15398
AFFX-BioB-3_st
198.691
A
12.4609
AFFX-BioC-5_st
224.162
A
7.78226
AFFX-BioC-3_st
104.991
A
3.80981
AFFX-BioDn-5_st
94.4259
A
5.62148
AFFX-BioDn-3_st
241.049
P
20.3603
Total number of rows: 12488 Table truncated, full table size 339 Kbytes .Supplementary file
Size
Download
File type/resource
GSM39286.CEL.gz
2.7 Mb
(ftp) (http)
CEL
GSM39286.EXP.gz
525 b
(ftp) (http)
EXP