NCBI Logo
GEO Logo
   NCBI > GEO > Accession DisplayHelp Not logged in | LoginHelp
GEO help: Mouse over screen elements for information.
          Go
Sample GSM394434 Query DataSets for GSM394434
Status Public on Apr 20, 2010
Title UMARY-1544-PONS-miRNA
Sample type RNA
 
Source name Human Brain Tissue: PONS
Organism Homo sapiens
Characteristics gender: male
age: 32
pmi: 12.0
tissuebank: UMARY
prep_hyb_batch: K
tissue: pons
Extracted molecule total RNA
Extraction protocol TRIZOL
Label biotin
Label protocol Illumina Human MicroRNA Expression Universal Arrays
 
Hybridization protocol Illumina Human MicroRNA Expression Universal Arrays
Scan protocol Illumina Beadstation
Description Human Brain Tissue: PONS
Data processing Beadstudio Gene Expression Module v3.2.7, quantile normalization
 
Submission date Apr 20, 2009
Last update date May 15, 2009
Contact name J Raphael Gibbs
E-mail(s) [email protected]
Organization name National Institutue on Aging, NIH
Department Computational Biology Core
Lab Laboratory of Neurogenetics
Street address 35 Convent Drive, Bldg 35/1A1015, MSC3707
City Bethesda
State/province MD
ZIP/Postal code 20892
Country USA
 
Platform ID GPL8178
Series (1)
GSE15745 Abundant Quantitative Trait Loci for CpG Methylation and Expression Across Human Brain Tissues

Data table header descriptions
ID_REF
VALUE Signal
Detection_Pval Illumina Detection p-value

Data table
ID_REF VALUE Detection_Pval
ILMN_3167304 413.1231 0.72789
ILMN_3168038 805.7898 0.005095858
ILMN_3167890 40621.59 3.68E-38
ILMN_3167526 393.2483 0.7785133
ILMN_3167209 411.1785 0.7330853
ILMN_3167213 492.6058 0.4854918
ILMN_3167057 1867.005 3.60E-29
ILMN_3168313 400.6668 0.7602739
ILMN_3166972 430.1158 0.6804704
ILMN_3168149 877.3239 0.000822612
ILMN_3168527 402.0769 0.7567168
ILMN_3167562 362.7058 0.8447551
ILMN_3168099 2366.148 3.68E-38
ILMN_3168017 1028.246 6.26E-06
ILMN_3167951 881.8314 0.000725722
ILMN_3167172 455.085 0.6052945
ILMN_3167994 631.2913 0.1234328
ILMN_3166997 553.0535 0.2997057
ILMN_3166980 507.1118 0.4389263
ILMN_3168362 683.2203 0.05728584

Total number of rows: 735

Table truncated, full table size 22 Kbytes.




Supplementary data files not provided
Processed data included within Sample table

| NLM | NIH | GEO Help | Disclaimer | Accessibility |
NCBI Home NCBI Search NCBI SiteMap