GEO Publications
Handout
NAR 2024 (latest)
NAR 2002 (original)
All publications
FAQ
MIAME
Email GEO
NCBI
>
GEO
>
Accession Display
Not logged in |
Login
GEO help:
Mouse over screen elements for information.
Scope:
Self
Platform
Samples
Series
Family
Format:
HTML
SOFT
MINiML
Amount:
Brief
Quick
GEO accession:
Sample GSM398070
Query DataSets for GSM398070
Status
Public on Jun 02, 2009
Title
Liver_E6
Sample type
RNA
Source name
Liver, KIKO E6
Organism
Mus musculus
Characteristics
genotype: KIKO
tissue: liver
Growth protocol
6-month old mice
Extracted molecule
total RNA
Extraction protocol
Trizol
Label
Biotin
Label protocol
Illumina protocol
Hybridization protocol
Illumina protocol
Scan protocol
Illumina protocol
Description
1541669114_G
Data processing
BeadStudio, quantile normalization
Submission date
Apr 27, 2009
Last update date
Jun 01, 2009
Contact name
Giovanni Coppola
E-mail(s)
[email protected]
Phone
310-794-4172
Organization name
UCLA
Department
Psychiatry and Neurology
Lab
Neurogenetics
Street address
1524 Gonda, 695 Charles Young Drive South
City
Los Angeles
State/province
CA
ZIP/Postal code
90095
Country
USA
Platform ID
GPL6100
Series (2)
GSE15848
Functional genomic analysis of frataxin deficiency, Illumina data
GSE15849
Functional genomic analysis of frataxin deficiency
Data table header descriptions
ID_REF
VALUE
Log2 transformed, quantile normalized expresssion levels
Data table
ID_REF
VALUE
50014
6.899450205
50017
7.150391349
50019
7.106417598
50020
7.823353795
50022
6.560085946
50025
7.026256456
50026
11.55926774
50035
6.956316781
50037
7.556639188
50039
10.27938609
50040
7.158582417
50041
8.684778595
50044
7.618391683
50048
7.162085993
50050
6.78511166
50059
6.895519404
50066
6.553722692
50068
6.887926625
50070
6.807466547
50072
6.868835858
Total number of rows:
23978
Table truncated, full table size
461 Kbytes
.
Supplementary data files not provided
Processed data included within Sample table
|
NLM
|
NIH
|
GEO Help
|
Disclaimer
|
Accessibility
|