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Sample GSM400483 Query DataSets for GSM400483
Status Public on May 08, 2009
Title lung 88
Sample type RNA
 
Source name lung
Organism Mus musculus
Characteristics tissue: lung
Treatment protocol RNA extraction from tissues of naïve male (except females for specific organs) C57BL/6J mice, 8-10 weeks of age
Extracted molecule total RNA
Extraction protocol Total RNA was isolated from cell pellets using Trizol (Invitrogen, Carlsbad, CA) followed by clean up using the RNeasy kit (Qiagen, Valencia, CA, USA).
Label biotin
Label protocol 2 ug total RNA was used with the GeneChip WT Sense Target Labeling Kit
 
Hybridization protocol standard Affymetrix procedures
Scan protocol standard Affymetrix procedures using GCS3000 scanner
Description lung
Data processing RMA
 
Submission date May 06, 2009
Last update date May 07, 2009
Contact name John R Walker
E-mail(s) [email protected]
Phone 858-812-1636
Organization name Genomics Institute of the Novartis Research Foundation
Lab Genetics Core
Street address 10675 John Jay Hopkins
City San Diego
State/province CA
ZIP/Postal code 92121
Country USA
 
Platform ID GPL6193
Series (1)
GSE15998 Mouse Exon Atlas

Data table header descriptions
ID_REF
VALUE RMA signal

Data table
ID_REF VALUE
4304920 4.242612
4304921 2.11729
4304922 2.467527
4304923 6.69812
4304925 6.458852
4304927 3.066475
4304928 11.841508
4304929 10.271749
4304930 3.675598
4304931 3.817592
4304932 7.783337
4304933 4.315349
4304934 3.392887
4304935 3.15785
4304937 2.282845
4304938 2.829546
4304939 2.702729
4304940 4.912042
4304941 4.98389
4304942 8.292388

Total number of rows: 1201338

Table truncated, full table size 19837 Kbytes.




Supplementary file Size Download File type/resource
GSM400483.CEL.gz 38.4 Mb (ftp)(http) CEL
Processed data included within Sample table

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