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Status
Public on Jun 02, 2005
Title
DEHP 168hr treated1
Sample type
RNA
Source name
Liver
Organism
Rattus norvegicus Extracted molecule
total RNA
Description
Male SD rats were given a single dose of 20g/kg DEHP in distilled water as vehicle. Animal was sacrificed 168hrs post-dosing. Total RNA was extracted using the RNA STAT-60 kit from Tel-Test inc. Approximately 10ug of RNA was labeled according to the standard Affymetrix protocol. Signal values were calculated using the MAS 5.0 algorithm, with global scaling to 1500
Submission date
Feb 22, 2005
Last update date
Jun 02, 2005
Contact name
Keith M Goldstein
E-mail(s)
[email protected] Organization name
Eli Lilly & Co.
Department
Investigative Toxicology
Lab
Keith Goldstein
Street address
Lilly Corporate Center
City
Indianapolis
State/province
IN
ZIP/Postal code
46285
Country
USA
Platform ID
GPL85 Series (1)
GSE2303 Rat liver response to Clofibrate, DEHP or VPA
Data table header descriptions ID_REF Affymetrix probeset ID
VALUE Signal from MAS5 with global scaling to 1500
ABS_CALL the call in an absolute analysis that indicates if the transcript was present (P), absent (A), marginal (M), or no call (NC)
DETECTION P-VALUE 'detection p-value', p-value that indicates the significance level of the detection call
Data table ID_REF VALUE ABS_CALL DETECTION P-VALUE rc_AA799636_at
194.894943
P
0.039365
rc_AA859777_f_at
70.847397
A
0.697453
U15280_at
37.045948
A
0.892699
AF001953_at
223.454376
A
0.397994
U15425_at
145.861115
A
0.47938
rc_AA893933_at
450.054077
A
0.35869
rc_AI639320_at
48.183128
A
0.339558
X66870_at
1222.803101
A
0.081337
rc_AA891965_at
457.089844
A
0.127645
M75148_at
322.412384
A
0.541184
rc_AA944007_g_at
7887.086914
P
0.000322
M94548_at
23293.55859
P
0.000219
rc_AI638941_at
7.462481
A
0.996415
X90475cds_at
185.678223
A
0.418069
U25651_at
670.829407
P
0.011447
rc_AA875146_s_at
2525.983643
P
0.001354
S35751_f_at
6276.299316
P
0.000266
rc_AA800768_at
93.706879
A
0.150527
rc_AI230789_at
15.135671
A
0.910595
X75785_at
159.272522
P
0.014937
8799 300 Kbytes .Supplementary file Size Download File type/resource GSM42960.CEL.gz
1.9 Mb
(ftp) (http) CEL
GSM42960.CHP.gz
3.0 Mb
(ftp) (http) CHP
GSM42960.EXP.gz
506 b
(ftp) (http) EXP
Processed data provided as supplementary file
