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Sample GSM4800757 Query DataSets for GSM4800757
Status Public on Apr 07, 2021
Title 21-30-batch_1-IL17AF_10_ng_ml
Sample type RNA
 
Source name abdominal skin
Organism Homo sapiens
Characteristics sample_id: 21
donor_id: 30
rna_integrity: 8.7
batch: batch_1
treatment: IL17AF_10_ng_ml
Extracted molecule total RNA
Extraction protocol RNA was extracted from ex vivo cultured human skin biopsies using the mirVana kit (Life Technologies) according to the manufacturer’s instructions and Precellys® 24 bead-based homogenizer (Precellys® Bertin Technologies, France) for the mechanical lysing of the tissue.
Label biotin
Label protocol The extracts were labeled with GeneChip™ WT Terminal Labeling Kit according to the manufacturer's instructions.
 
Hybridization protocol Hybridizations was performed with the GeneChip™ Hybridization Control Kit according to the manufacturer's instructions.
Scan protocol Scanning has been performed according to the GeneTitan manufacturer's instructions.
Data processing The normalization and summarization was carried out in R, using RMA (Affy) and robust quantile normalization (preprocessCore)
 
Submission date Sep 23, 2020
Last update date Apr 09, 2021
Contact name Maxim Alexandre Xavier Tollenaere
E-mail(s) [email protected]
Phone +4531327695
Organization name LEO Pharma
Department Advanced Biologics
Street address Industriparken 55
City Ballerup
ZIP/Postal code 2750
Country Denmark
 
Platform ID GPL17692
Series (1)
GSE158448 Multiple IL-17 family cytokines signaling through IL-17RA drive inflammatory pathways in psoriasis

Data table header descriptions
ID_REF
VALUE log2 RMA signal

Data table
ID_REF VALUE
16650001 1.11584029
16650003 2.203006375
16650005 2.091456231
16650007 1.295066897
16650009 1.033741192
16650011 1.963144967
16650013 2.093102767
16650015 4.058641683
16650017 0.966196346
16650019 1.006133144
16650021 1.477404245
16650023 2.467670788
16650025 1.54932016
16650027 1.778985993
16650029 2.744495243
16650031 2.916516417
16650033 0.994911408
16650035 0.973341752
16650037 1.479051433
16650041 3.025190429

Total number of rows: 53617

Table truncated, full table size 1093 Kbytes.




Supplementary file Size Download File type/resource
GSM4800757_A3709_21.CEL.gz 4.1 Mb (ftp)(http) CEL
Processed data included within Sample table
Processed data are available on Series record

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