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Sample GSM4800759 Query DataSets for GSM4800759
Status Public on Apr 07, 2021
Title 23-32-batch_2-IL17AF_10_ng_ml
Sample type RNA
 
Source name abdominal skin
Organism Homo sapiens
Characteristics sample_id: 23
donor_id: 32
rna_integrity: 9.6
batch: batch_2
treatment: IL17AF_10_ng_ml
Extracted molecule total RNA
Extraction protocol RNA was extracted from ex vivo cultured human skin biopsies using the mirVana kit (Life Technologies) according to the manufacturer’s instructions and Precellys® 24 bead-based homogenizer (Precellys® Bertin Technologies, France) for the mechanical lysing of the tissue.
Label biotin
Label protocol The extracts were labeled with GeneChip™ WT Terminal Labeling Kit according to the manufacturer's instructions.
 
Hybridization protocol Hybridizations was performed with the GeneChip™ Hybridization Control Kit according to the manufacturer's instructions.
Scan protocol Scanning has been performed according to the GeneTitan manufacturer's instructions.
Data processing The normalization and summarization was carried out in R, using RMA (Affy) and robust quantile normalization (preprocessCore)
 
Submission date Sep 23, 2020
Last update date Apr 09, 2021
Contact name Maxim Alexandre Xavier Tollenaere
E-mail(s) [email protected]
Phone +4531327695
Organization name LEO Pharma
Department Advanced Biologics
Street address Industriparken 55
City Ballerup
ZIP/Postal code 2750
Country Denmark
 
Platform ID GPL17692
Series (1)
GSE158448 Multiple IL-17 family cytokines signaling through IL-17RA drive inflammatory pathways in psoriasis

Data table header descriptions
ID_REF
VALUE log2 RMA signal

Data table
ID_REF VALUE
16650001 0.741669978
16650003 1.266394838
16650005 1.198618631
16650007 2.056840061
16650009 0.887722639
16650011 1.181119879
16650013 1.841415767
16650015 3.949682312
16650017 1.500569762
16650019 1.71589426
16650021 1.114323345
16650023 2.528003911
16650025 2.566659252
16650027 0.695674816
16650029 3.491309779
16650031 2.038989587
16650033 0.620628213
16650035 1.591378852
16650037 1.726164887
16650041 2.877453082

Total number of rows: 53617

Table truncated, full table size 1093 Kbytes.




Supplementary file Size Download File type/resource
GSM4800759_A3709_23.CEL.gz 4.1 Mb (ftp)(http) CEL
Processed data included within Sample table
Processed data are available on Series record

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