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Sample GSM4800766 Query DataSets for GSM4800766
Status Public on Apr 07, 2021
Title 30-42-batch_4-IL17AF_100_ng_ml
Sample type RNA
 
Source name abdominal skin
Organism Homo sapiens
Characteristics sample_id: 30
donor_id: 42
rna_integrity: 9.6
batch: batch_4
treatment: IL17AF_100_ng_ml
Extracted molecule total RNA
Extraction protocol RNA was extracted from ex vivo cultured human skin biopsies using the mirVana kit (Life Technologies) according to the manufacturer’s instructions and Precellys® 24 bead-based homogenizer (Precellys® Bertin Technologies, France) for the mechanical lysing of the tissue.
Label biotin
Label protocol The extracts were labeled with GeneChip™ WT Terminal Labeling Kit according to the manufacturer's instructions.
 
Hybridization protocol Hybridizations was performed with the GeneChip™ Hybridization Control Kit according to the manufacturer's instructions.
Scan protocol Scanning has been performed according to the GeneTitan manufacturer's instructions.
Data processing The normalization and summarization was carried out in R, using RMA (Affy) and robust quantile normalization (preprocessCore)
 
Submission date Sep 23, 2020
Last update date Apr 09, 2021
Contact name Maxim Alexandre Xavier Tollenaere
E-mail(s) [email protected]
Phone +4531327695
Organization name LEO Pharma
Department Advanced Biologics
Street address Industriparken 55
City Ballerup
ZIP/Postal code 2750
Country Denmark
 
Platform ID GPL17692
Series (1)
GSE158448 Multiple IL-17 family cytokines signaling through IL-17RA drive inflammatory pathways in psoriasis

Data table header descriptions
ID_REF
VALUE log2 RMA signal

Data table
ID_REF VALUE
16650001 0.922576134
16650003 1.373035573
16650005 1.320122836
16650007 0.899181636
16650009 0.86535077
16650011 0.766614429
16650013 1.860865823
16650015 4.481391743
16650017 1.324714365
16650019 2.835473775
16650021 2.079522334
16650023 1.737158372
16650025 1.656576675
16650027 0.990635314
16650029 2.424272475
16650031 2.378831682
16650033 0.939733377
16650035 1.663967786
16650037 1.369803301
16650041 3.053580315

Total number of rows: 53617

Table truncated, full table size 1093 Kbytes.




Supplementary file Size Download File type/resource
GSM4800766_A3709_30.CEL.gz 4.4 Mb (ftp)(http) CEL
Processed data included within Sample table
Processed data are available on Series record

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