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Sample GSM4800767 Query DataSets for GSM4800767
Status Public on Apr 07, 2021
Title 31-43-batch_1-IL17F_10_ng_ml
Sample type RNA
 
Source name abdominal skin
Organism Homo sapiens
Characteristics sample_id: 31
donor_id: 43
rna_integrity: 9.1
batch: batch_1
treatment: IL17F_10_ng_ml
Extracted molecule total RNA
Extraction protocol RNA was extracted from ex vivo cultured human skin biopsies using the mirVana kit (Life Technologies) according to the manufacturer’s instructions and Precellys® 24 bead-based homogenizer (Precellys® Bertin Technologies, France) for the mechanical lysing of the tissue.
Label biotin
Label protocol The extracts were labeled with GeneChip™ WT Terminal Labeling Kit according to the manufacturer's instructions.
 
Hybridization protocol Hybridizations was performed with the GeneChip™ Hybridization Control Kit according to the manufacturer's instructions.
Scan protocol Scanning has been performed according to the GeneTitan manufacturer's instructions.
Data processing The normalization and summarization was carried out in R, using RMA (Affy) and robust quantile normalization (preprocessCore)
 
Submission date Sep 23, 2020
Last update date Apr 09, 2021
Contact name Maxim Alexandre Xavier Tollenaere
E-mail(s) [email protected]
Phone +4531327695
Organization name LEO Pharma
Department Advanced Biologics
Street address Industriparken 55
City Ballerup
ZIP/Postal code 2750
Country Denmark
 
Platform ID GPL17692
Series (1)
GSE158448 Multiple IL-17 family cytokines signaling through IL-17RA drive inflammatory pathways in psoriasis

Data table header descriptions
ID_REF
VALUE log2 RMA signal

Data table
ID_REF VALUE
16650001 0.876923917
16650003 0.970657855
16650005 2.586381291
16650007 0.834159383
16650009 0.901236998
16650011 1.169639059
16650013 2.091290785
16650015 4.255381375
16650017 0.835212418
16650019 2.152649747
16650021 2.859108626
16650023 1.520880243
16650025 3.509417075
16650027 2.844825912
16650029 2.538654088
16650031 2.541447591
16650033 1.11571408
16650035 1.405460918
16650037 1.259943306
16650041 5.215117417

Total number of rows: 53617

Table truncated, full table size 1093 Kbytes.




Supplementary file Size Download File type/resource
GSM4800767_A3709_31.CEL.gz 4.4 Mb (ftp)(http) CEL
Processed data included within Sample table
Processed data are available on Series record

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