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Sample GSM4800775 Query DataSets for GSM4800775
Status Public on Apr 07, 2021
Title 39-55-batch_3-IL17F_100_ng_ml
Sample type RNA
 
Source name abdominal skin
Organism Homo sapiens
Characteristics sample_id: 39
donor_id: 55
rna_integrity: 9.5
batch: batch_3
treatment: IL17F_100_ng_ml
Extracted molecule total RNA
Extraction protocol RNA was extracted from ex vivo cultured human skin biopsies using the mirVana kit (Life Technologies) according to the manufacturer’s instructions and Precellys® 24 bead-based homogenizer (Precellys® Bertin Technologies, France) for the mechanical lysing of the tissue.
Label biotin
Label protocol The extracts were labeled with GeneChip™ WT Terminal Labeling Kit according to the manufacturer's instructions.
 
Hybridization protocol Hybridizations was performed with the GeneChip™ Hybridization Control Kit according to the manufacturer's instructions.
Scan protocol Scanning has been performed according to the GeneTitan manufacturer's instructions.
Data processing The normalization and summarization was carried out in R, using RMA (Affy) and robust quantile normalization (preprocessCore)
 
Submission date Sep 23, 2020
Last update date Apr 09, 2021
Contact name Maxim Alexandre Xavier Tollenaere
E-mail(s) [email protected]
Phone +4531327695
Organization name LEO Pharma
Department Advanced Biologics
Street address Industriparken 55
City Ballerup
ZIP/Postal code 2750
Country Denmark
 
Platform ID GPL17692
Series (1)
GSE158448 Multiple IL-17 family cytokines signaling through IL-17RA drive inflammatory pathways in psoriasis

Data table header descriptions
ID_REF
VALUE log2 RMA signal

Data table
ID_REF VALUE
16650001 2.174102159
16650003 1.016187549
16650005 1.443200307
16650007 2.03956523
16650009 0.827265422
16650011 1.457854985
16650013 2.563281191
16650015 4.398698412
16650017 1.850837064
16650019 1.186036291
16650021 1.153259984
16650023 2.226641864
16650025 2.336991334
16650027 2.09041474
16650029 2.19097508
16650031 2.784610719
16650033 0.810960553
16650035 1.178899494
16650037 2.418500707
16650041 4.502793534

Total number of rows: 53617

Table truncated, full table size 1093 Kbytes.




Supplementary file Size Download File type/resource
GSM4800775_A3709_39.CEL.gz 4.3 Mb (ftp)(http) CEL
Processed data included within Sample table
Processed data are available on Series record

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