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Sample GSM4800780 Query DataSets for GSM4800780
Status Public on Apr 07, 2021
Title 44-62-batch_3-IL17C_10_ng_ml
Sample type RNA
 
Source name abdominal skin
Organism Homo sapiens
Characteristics sample_id: 44
donor_id: 62
rna_integrity: 9.1
batch: batch_3
treatment: IL17C_10_ng_ml
Extracted molecule total RNA
Extraction protocol RNA was extracted from ex vivo cultured human skin biopsies using the mirVana kit (Life Technologies) according to the manufacturer’s instructions and Precellys® 24 bead-based homogenizer (Precellys® Bertin Technologies, France) for the mechanical lysing of the tissue.
Label biotin
Label protocol The extracts were labeled with GeneChip™ WT Terminal Labeling Kit according to the manufacturer's instructions.
 
Hybridization protocol Hybridizations was performed with the GeneChip™ Hybridization Control Kit according to the manufacturer's instructions.
Scan protocol Scanning has been performed according to the GeneTitan manufacturer's instructions.
Data processing The normalization and summarization was carried out in R, using RMA (Affy) and robust quantile normalization (preprocessCore)
 
Submission date Sep 23, 2020
Last update date Apr 09, 2021
Contact name Maxim Alexandre Xavier Tollenaere
E-mail(s) [email protected]
Phone +4531327695
Organization name LEO Pharma
Department Advanced Biologics
Street address Industriparken 55
City Ballerup
ZIP/Postal code 2750
Country Denmark
 
Platform ID GPL17692
Series (1)
GSE158448 Multiple IL-17 family cytokines signaling through IL-17RA drive inflammatory pathways in psoriasis

Data table header descriptions
ID_REF
VALUE log2 RMA signal

Data table
ID_REF VALUE
16650001 1.81246615
16650003 2.004905983
16650005 3.155284135
16650007 0.662251399
16650009 0.717160377
16650011 0.860794349
16650013 3.322145944
16650015 4.475753872
16650017 2.264880033
16650019 2.176186254
16650021 1.132750981
16650023 2.211577628
16650025 1.669737814
16650027 3.742613747
16650029 2.341477775
16650031 2.331758512
16650033 0.509981317
16650035 1.904608899
16650037 1.384609533
16650041 3.028673868

Total number of rows: 53617

Table truncated, full table size 1093 Kbytes.




Supplementary file Size Download File type/resource
GSM4800780_A3709_44.CEL.gz 4.5 Mb (ftp)(http) CEL
Processed data included within Sample table
Processed data are available on Series record

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