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Sample GSM51905

Query DataSets for GSM51905

Status

Public on Jul 19, 2005

Title

1282_BMA_5

Sample type

RNA

Source name

Wild-type BMA64

Organism

Saccharomyces cerevisiae

Extracted molecule

total RNA

Description

Strain background is BMA64 with plasmid expressing TRP marker Media is SD -Trp (synthetic dextrose minimal media missing tryptophan) Cells were grown until midlog and harvested at OD600=0.4; MAS5 (Statistical Algorithm) Scaling:All Probe Sets Target Signal 500;Normalization:All Probe Sets; Alpha1=0.04; Alpha2=0.06; Tau=0.015

Submission date

May 19, 2005

Last update date

May 29, 2005

Contact name

Guillaume Francois Chanfreau

E-mail(s)

[email protected]

Phone

1-310-825-4399

Organization name

UCLA

Department

Chemistry and Biochemistry

Street address

607 Charles E. Young Drive East

City

Los Angeles

State/province

ZIP/Postal code

90095-1569

Country

USA

Platform ID

GPL90

Series (1)

GSE2683

Rnt1 KO Sc and Wild-type BMA64 Sc

Data table header descriptions
ID_REF
VALUE	MAS5 SA Signal
ABS_CALL	MAS5 SA Detection
DETECTION P-VALUE	MAS5 SA Detection P-value

Data table
ID_REF	VALUE	ABS_CALL	DETECTION P-VALUE
AFFX-MurIL2_at	10.2	A	0.941556
AFFX-MurIL10_at	2.8	A	0.86866
AFFX-MurIL4_at	6.6	A	0.981728
AFFX-MurFAS_at	2.2	A	0.9989
AFFX-BioB-5_at	359.7	P	0.003595
AFFX-BioB-M_at	628.7	P	0.000127
AFFX-BioB-3_at	518.5	P	0.000147
AFFX-BioC-5_at	1115.4	P	0.000169
AFFX-BioC-3_at	972.1	P	0.000044
AFFX-BioDn-5_at	937.7	P	0.000044
AFFX-BioDn-3_at	7497.4	P	0.000044
AFFX-CreX-5_at	11545.7	P	0.000044
AFFX-CreX-3_at	16733	P	0.000044
AFFX-BioB-5_st	20.7	A	0.631573
AFFX-BioB-M_st	31.4	A	0.794268
AFFX-BioB-3_st	18.9	A	0.724854
AFFX-BioC-5_st	20.5	A	0.84329
AFFX-BioC-3_st	8.2	A	0.860518
AFFX-BioDn-5_st	60.9	A	0.48511
AFFX-BioDn-3_st	23.1	A	0.368394

Total number of rows: 9335

Table truncated, full table size 226 Kbytes.

Supplementary data files not provided