NCBI Logo
GEO Logo
   NCBI > GEO > Accession DisplayHelp Not logged in | LoginHelp
GEO help: Mouse over screen elements for information.
          Go
Sample GSM532833 Query DataSets for GSM532833
Status Public on Apr 24, 2010
Title impaired fasting glucose 7
Sample type RNA
 
Source name blood
Organism Homo sapiens
Characteristics patient type: impaired fasting glucose 7
gender: male
Extracted molecule total RNA
Extraction protocol RNA was extracted with Trizol reagent, followed by clean-up and DNase I treatment with QIAGEN RNeasy mini kit in accordance with the prescribed protocol provided with the kit. Quality control was performed with Agilent Bioanalyser.
Label biotin
Label protocol Biotinylated cRNA were prepared with the Ambion MessageAmp kit for Illumina arrays
 
Hybridization protocol Standard Illumina hybridization protocol
Scan protocol Standard Illumina scanning protocol
Description replicate 7
Data processing The signal intensity was background subtracted and subsequently used for analysis
 
Submission date Apr 13, 2010
Last update date Apr 23, 2010
Contact name Kandiah Jeyaseelan
E-mail(s) [email protected]
Organization name National University of Singapore
Department Biochemistry
Street address 8 Medical Drive
City Singapore
ZIP/Postal code 117597
Country Singapore
 
Platform ID GPL6883
Series (2)
GSE21321 Blood microRNA profiles and upregulation of hsa-miR-144 in males with type 2 diabetes mellitus.
GSE26168 Type 2 Diabetes mellitus: mRNA and miRNA profiling

Data table header descriptions
ID_REF
VALUE background subtracted signal value
Detection Pval

Data table
ID_REF VALUE Detection Pval
ILMN_1809034 8.3 0.24437
ILMN_1660305 68.7 0
ILMN_1762337 -12 0.84244
ILMN_2055271 9.1 0.23955
ILMN_1814316 -7.2 0.69132
ILMN_2359168 3.9 0.33923
ILMN_1731507 3.8 0.34887
ILMN_1787689 31.2 0.03376
ILMN_1745607 -4.5 0.59486
ILMN_2136495 -25.1 0.99839
ILMN_1668111 -10.6 0.80707
ILMN_2295559 -5.8 0.64791
ILMN_1735045 -11 0.81672
ILMN_1680754 33.7 0.02412
ILMN_2375184 -1.8 0.51286
ILMN_1659452 15.8 0.14952
ILMN_1767388 -11.3 0.81994
ILMN_1675204 -13.3 0.87942
ILMN_1673870 1.2 0.41801
ILMN_1755321 14.6 0.16238

Total number of rows: 24526

Table truncated, full table size 566 Kbytes.




Supplementary data files not provided
Processed data included within Sample table

| NLM | NIH | GEO Help | Disclaimer | Accessibility |
NCBI Home NCBI Search NCBI SiteMap