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Sample GSM60386 Query DataSets for GSM60386
Status Public on Nov 15, 2005
Title wild type parietal cell replicate 2
Sample type RNA
 
Source name WT fundus
Organism Mus musculus
Characteristics Wild type, 2 month old male mice parietal cell
Extracted molecule total RNA
Extraction protocol Approximately10-14 wild-type mice were dissected and the fundus was used to isolate parietal cells and purified by flow cytometry. Total RNA was extracted from the purified parietal cells by Trizol followed by an RNeasy kit (Qiagen).
Label biotin
Label protocol Approximately 1 µg of total RNA was processed to produce biotinylated cRNA targets.
 
Hybridization protocol standard Affymetrix procedures
Scan protocol standard Affymetrix procedures
Description Wild type purified (>90% pure) parietal cells
Data processing Affymetrix Microarray Suite version 4.0
 
Submission date Jun 06, 2005
Last update date Nov 15, 2005
Contact name Linda Samuelson
E-mail(s) [email protected]
Phone 734-764-9448
Fax 734-936-8813
Organization name University of Michigan
Department Molecular and Integrative Physiology
Street address MED SCI II, # 7761, 1150 W. MEDICAL CENTER DRIVE
City ANN ARBOR
State/province MI
ZIP/Postal code 48109
Country USA
 
Platform ID GPL81
Series (1)
GSE2772 Parietal cell gene expression in the presence and absence of gastrin

Data table header descriptions
ID_REF
VALUE probe-set signal intensity from Ann Arbor Suite
DETECTION P-VALUE 'detection p-value', p-value that indicates the significance level of the detection call

Data table
ID_REF VALUE DETECTION P-VALUE
96643_at 595 0.016
92805_s_at 52 0.24
101326_at 68 0.29
101455_at 86 0.25
102737_at 162 0.099
92492_at 300 0.0024
97426_at 3307 0.00028
96188_at 129 0.19
99138_at 122 0.069
104333_at 414 0.00082
103949_at 489 0.0043
101294_g_at 496 0.0087
101542_f_at 1445 0.00058
160901_at 5611 0.00023
92507_at 119 0.0031
96629_at 784 0.00074
92925_at 480 0.025
99926_at 1399 0.012
102292_at 1383 0.00039
96336_at 64 0.13

Total number of rows: 12488

Table truncated, full table size 245 Kbytes.




Supplementary data files not provided

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