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Sample GSM65130 Query DataSets for GSM65130
Status Public on Mar 20, 2006
Title Exon4_3
Sample type RNA
 
Source name HEK293 cell line
Organism Homo sapiens
Characteristics stably transfected with delta exon4 mutant of surfactant protein C
Extracted molecule total RNA
Extraction protocol accroding to manufacture's protocol (Affymetrix)
Label biotin
Label protocol accroding to manufacture's protocol (Affymetrix)
 
Hybridization protocol accroding to manufacture's protocol (Affymetrix)
Scan protocol accroding to manufacture's protocol (Affymetrix)
Description stably transfected with delta exon4 mutant of surfactant protein C
Data processing RMA normalization, Permutation and ANOVA
 
Submission date Jul 21, 2005
Last update date Jan 20, 2009
Contact name James Patrick Bridges
E-mail(s) [email protected]
Fax 513-636-7868
Organization name Cincinnati Children's Hospital Medical Center
Department Pulmonary Biology
Lab Weaver
Street address 3333 Burnet Avenue
City Cincinnati
State/province OH
ZIP/Postal code 45229
Country USA
 
Platform ID GPL96
Series (1)
GSE2980 Constitutive expression of misfolded surfactant protein C

Data table header descriptions
ID_REF
VALUE Affymetrix calculated signal intensity
ABS_CALL Affymetrix detection call
DETECTION P-VALUE Affymetrix calculated detection p-value

Data table
ID_REF VALUE ABS_CALL DETECTION P-VALUE
AFFX-BioB-5_at 524.4 P 0.003595
AFFX-BioB-M_at 1142 P 0.000169
AFFX-BioB-3_at 356 P 0.005565
AFFX-BioC-5_at 1408.4 P 0.000127
AFFX-BioC-3_at 1075.9 P 0.00011
AFFX-BioDn-5_at 1382.6 P 0.00011
AFFX-BioDn-3_at 8584.9 P 0.000195
AFFX-CreX-5_at 13037.5 P 0.000044
AFFX-CreX-3_at 21878.6 P 0.000044
AFFX-DapX-5_at 51.7 M 0.058444
AFFX-DapX-M_at 90.6 A 0.175328
AFFX-DapX-3_at 11.2 A 0.9273
AFFX-LysX-5_at 5.7 A 0.712257
AFFX-LysX-M_at 15.9 A 0.860518
AFFX-LysX-3_at 28.8 A 0.41138
AFFX-PheX-5_at 19.7 A 0.804734
AFFX-PheX-M_at 10.1 A 0.910522
AFFX-PheX-3_at 43.2 A 0.659339
AFFX-ThrX-5_at 23 A 0.737173
AFFX-ThrX-M_at 16.8 A 0.749204

Total number of rows: 22283

Table truncated, full table size 601 Kbytes.




Supplementary file Size Download File type/resource
GSM65130.CEL.gz 3.4 Mb (ftp)(http) CEL

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