|
| Status |
Public on Apr 18, 2012 |
| Title |
T cell Acute Lymphoblastic Leukemia 1 |
| Sample type |
genomic |
| |
|
| Source name |
The same T cell ALL as LALT obtained from the spleen of mouse
|
| Organism |
Homo sapiens |
| Characteristics |
cell type: T cell ALL
|
| Growth protocol |
Samples 421, 739, 1 and 226 have been obtained from spleen of immunodeficient mice.
|
| Extracted molecule |
genomic DNA |
| Extraction protocol |
genomic DNA was extracted using QIAmp DNA Mini Kit following the manufacturer´s instructions (Qiagen, Hilden, Germany).
|
| Label |
biotin
|
| Label protocol |
According to manufacturer's protocol.
|
| |
|
| Hybridization protocol |
According to manufacturer's protocol.
|
| Scan protocol |
According to manufacturer's protocol.
|
| Data processing |
The CEL files were analyzed using the aroma.affymetrix package of R/Bioconductor (CRLMM-algorithm to produce genotype calls and SNPRMA to produce the summarized signal).
|
| |
|
| Submission date |
Jan 21, 2011 |
| Last update date |
Apr 19, 2012 |
| Contact name |
Xabier Agirre |
| E-mail(s) |
[email protected]
|
| Phone |
+34 948194700
|
| Organization name |
CIMA
|
| Department |
Oncology
|
| Street address |
Pio XII, 55
|
| City |
Pamplona |
| State/province |
Navarra |
| ZIP/Postal code |
31008 |
| Country |
Spain |
| |
|
| Platform ID |
GPL3720 |
| Series (2) |
| GSE26792 |
The HDAC inhibitor panobinostat (LBH589) inhibits Acute Lymphoblastic leukemia (ALL) in vitro and in vivo in a new characterized human ALL mice model (SNP) |
| GSE26807 |
The HDAC inhibitor panobinostat (LBH589) inhibits Acute Lymphoblastic leukemia (ALL) in vitro and in vivo in a new characterized human ALL mice model |
|
